Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2847 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCAAAGCGGCTTGGTGATCTTCAGCCTGCCCCACAACCTATTGACCAAGAAGAGAATTGCGAACAACCTGCACCAAACAAAACCAAAAGGAGAGTGGGAGGTGGAAGAGGAAGAGGTGGGAATGCCCCAGCTTTAGCAAAAAGGCCTTCAGCAGCAGTACCCCCAAGGCGAACTGCAGCTGGTAGGGGCCGCGGAGGTAGACTTATTGATCTTGTTCCTGAACCTATTGTATTTGGGGCCCCCGAACCCGTCAACAACCGTGTAGAGGTAGCGGCCAATAAGAATATTGTGATGGCTGGTGGAAGTGCTGACAAGGTCATAGGAGCTGAGGAGGATGCATGCACAACCCCCGTCCCTGAGACGGTACAAGTTGGTAGTTCTCCTTTATATAAGATAGAAACAAAATTGGGTAAGGGTGGTTTTGGCCAAGTTTATGTTGGCAGAAAGGTAAATGGTGGATCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAACACAGAAATAGTAAAGGTTGCAATTATGGACCTCCTTATGAATGGCAAGTCTACAATACTCTGAATGGTTGCTATGGCATTCCCTGGGTTCATTACAAGGGTCGCCAAGGAGACTTCTATATTCTGGTAATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAGTCGATGTCGCCAAATATGGCTGCATGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCACATGAAAGGGTTTGTGCATGGAGACGTTAAACCAGAAAACTTTTTACTTGGTCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGACCTTGGTTTGGCATCTAAATGGAAGGACACGGGATCTGGTCAACATGTTGAATATGATCAAAGGCCTGATATATTTAGGGGAACCATAAGGTATGCAAGTGTACATGCACATTTAGGTAGGACTGGAAGTAGGAGGGACGATCTTGAATCACTGGCATACACATTAATATTTCTCATAAAAGGGAGGTTGCCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCGTTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCTAATTATTCCAAGCTCATATCTTTTTTTGATAGCTTGATTGAACCATGTACACAATTAAGGCCCATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAAAGGGCTAGAATGCCTATAAATCTTGAAGAAGATGAGCAGCCAAAGAAGAAAGTGCGACTGGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAACGCACGTCGCCCCATGAAGCAAAGATATCACTATAATGTTGCAGACTCTAGGCTCAAACAGCATGTAGACAAGGGTAATGAGGATGGGTTATATATCAGCTGTGTAGCCTCTTCATCAAATCTTTGGGCCCTAATCATGGATGCAGGAACGGGTTTTTCCTCCCAGGTCTATGAATTATCAGCAGTCTTCCTGCATAAGGATTGGATTATGGAACAGTGGGAGAAAAACTACTATATTAGTTCAATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTCCCTACACACAGCAGTCCTACAAAGTGAGTGAATCATTTCCTTTCAAGTGGATAAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGCGTTGTGATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTATATCCAAGTGAAGGTATTCATCGGCGATGGGAGAATGGTTACCGAATAACATCTATGGCAGCTACTGCTGATCAGGCAGCCTTCATACTGAGCATTCCAAAACGTAAATTGCTTGACGAAACTCAAGAGACTCTGCGCACCTCTGCCTTCCCTAGCACCCATGTAAAGGAAAAGTGGTCCAAGAATCTCTATATCGCCTCAATCTGTTATGGGCGGACTGTCTGTTAA 2106 0.4463 MPELRSGARRSKRLGDLQPAPQPIDQEENCEQPAPNKTKRRVGGGRGRGGNAPALAKRPSAAVPPRRTAAGRGRGGRLIDLVPEPIVFGAPEPVNNRVEVAANKNIVMAGGSADKVIGAEEDACTTPVPETVQVGSSPLYKIETKLGKGGFGQVYVGRKVNGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMAACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKDTGSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFDSLIEPCTQLRPIRIDGALKVGQKRARMPINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADSRLKQHVDKGNEDGLYISCVASSSNLWALIMDAGTGFSSQVYELSAVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2847 701 CDD STKc_CK1 140 414 - -
Bisa07g2847 701 PANTHER CASEIN KINASE-RELATED 141 665 - -
Bisa07g2847 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Bisa07g2847 701 FunFam Casein kinase 1-like protein 112 460 - -
Bisa07g2847 701 SUPERFAMILY Protein kinase-like (PK-like) 140 425 IPR011009 -
Bisa07g2847 701 MobiDBLite consensus disorder prediction 1 73 - -
Bisa07g2847 701 Gene3D Transferase(Phosphotransferase) domain 1 112 464 - -
Bisa07g2847 701 SMART serkin_6 140 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2847 701 ProSitePatterns Protein kinases ATP-binding region signature. 146 177 IPR017441 GO:0005524
Bisa07g2847 701 ProSiteProfiles Protein kinase domain profile. 140 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2847 701 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2847 Bisa-ChrBisa07 61230152 61235042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2847 140 296 EF-hand Containing Proteins AT3G50530 25.316 3.63e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa07g2847 Pkinase 4.3e-16 CL0016