Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2840 ATGGCAATTGCACGAACAGGAGTTTACGTCGATGACTATTTGGAGTACGCGAGTACATTGCCTGCTGAGCTTCAGAGGTTGCTCAATACCATCAGAGAACTCGATGACCGATCCCAATCTATGATAAACCAGACGAGGCAGCAGACAAAGTACTGTTTGGGGTTGTCATCACATAGCAAGAAGGGTAATCACAACAGTGGCTATAATTATAATAACTACGTTAATGAAGAAGATGACACCGCTATTGAGAAAATGCGAAAAGAAATCGAGGCAAGTCAGGATAGTGCATTTAGTCTATGTACTGAGAAGGTTTTATTGGCAAGACAAGCCTATGACCTGATAGATAGCCATATAAAGCGACTTGATGAGGATCTGAACAACTTTGCTGAAGATCTAAAGCAAGAGGGGAAAATACCACCAGATGTACCAGCGATTCTCCCCCCATTGCCTATAGTTCTTAAAAGTGAAAAACGCAAGCCTTTATCTGGAACACCTCAATCAAAGAGACTTGATTATAGAGAGTGGGACAGAGAGCGTGACAGGGACTTTGAGCTCATGCCCCCACCAGGAAGTCATAAGAAGGAGTTTGCAACTTCTGTAGATTTTGATCAACCCATTGATCCTAATGAACCTACATACTGTGTTTGTCATCAGGTGTCTTTTGGCGATATGATTGCATGTGACAATGAAAATTGTCAAGGAGGTGAATGGTTCCACTATGCATGTGTTGGCCTAACACCAGAGACAAGGTTCAAGGGAAAGTGGTATTGCCCAACCTGCAAATTACTTCCACAATGTCAATGA 804 0.4254 MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMINQTRQQTKYCLGLSSHSKKGNHNSGYNYNNYVNEEDDTAIEKMRKEIEASQDSAFSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFAEDLKQEGKIPPDVPAILPPLPIVLKSEKRKPLSGTPQSKRLDYREWDRERDRDFELMPPPGSHKKEFATSVDFDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLTPETRFKGKWYCPTCKLLPQCQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2840 267 FunFam PHD finger protein ING 205 263 - -
Bisa07g2840 267 ProSiteProfiles Zinc finger PHD-type profile. 211 263 IPR019787 -
Bisa07g2840 267 SUPERFAMILY FYVE/PHD zinc finger 189 261 IPR011011 -
Bisa07g2840 267 PANTHER INHIBITOR OF GROWTH PROTEIN 2 261 IPR028651 -
Bisa07g2840 267 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 128 IPR024610 -
Bisa07g2840 267 Coils Coil 24 44 - -
Bisa07g2840 267 SMART ING_2 9 128 IPR024610 -
Bisa07g2840 267 SMART PHD_3 213 261 IPR001965 -
Bisa07g2840 267 CDD ING_plant 17 125 - -
Bisa07g2840 267 Gene3D - 5 126 - -
Bisa07g2840 267 Pfam PHD-finger 213 261 IPR019787 -
Bisa07g2840 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 262 IPR013083 -
Bisa07g2840 267 CDD PHD_ING 213 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2840 Bisa-ChrBisa07 61165608 61169591 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa07g2840 ING 1.6e-18 No_clan