Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2836 ATGGTGTACAGACTTTATATTATAAAAGTCTATCCTCTCCGGGTGGGAGAATGCCCGCCGGTTGACCTTCGTATACATTCACGTGCTGGTAGAAAAACAGTGGTAGGCAGGAGGGGCTATGGGCTATGGGCTATGGGCTATGGCCATGAAATTGTCATGGATGGAGGTGCTTATGGATTCATGGGTAAAATCGAATCCACCCCTCCATTCCTACTTCAGAAACACATTTCAAACTCGCCGGACATGGACGTCTGCCGGAATCTTTCAGTCTCCGGCGAGTGCGAACAAGAGCAGGTCCTCTCTCCTTCCTGTGCAAAGCTTTCCACCTTCTCAACCACCCTCGACGACCTCTTCTCTTCTCACAACACGGAAGTTGATGTTGACTTAGAATGGCTGTCAGTTTTTGTGGAAGACTGCTTTTCCAGCCCAGCAAGTTGCCTTCTGGCACCAACTGATGTTCAAGCTTCAAGCACAGACTCCAAACCCTCACGACAACTTCAGAAGAACCAGCAAAAGCAGTCTCCTCTGCCAAATTTTGTGGTGCCAGGAAAGGCAAGAAGCAAAAGGAAAAGACTATCAGCCCCTAGAACCAAAGACCCACGAAGCATCTGGTCGCACCATTTGAACCCACAAAACGAAGCCTTAGCTTCAGACCCTCCTCTTCTCAAACAAACCTACTGGTTAGCTGACAGTGAACTCATAGTCCCCAAACGGGAAGATGAAGATAAGGAAAATGATGGAGAAGCAGAACACGAGGAGGTGGGAGAGAAGGGGATTGAGAGGAAGAAGGAGAATTTGGGAAGCTTAGTCTCAGAGTGTGAAGAAAGTAGCAATGGGCAGAATCCAATGCCTAGAAGGTGCAGCCATTGCCTTGCACAGAGGACCCCACAATGGAGGGCAGGGCCATTGGGTCCAAAAACACTATGCAATGCATGTGGAGTGAGGTACAAGTCTGGCAGATTACTGCCAGAATATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTACTTGCACTCGAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCCGTTCTGTCTTCTATTCCTAGTGAGCACTAG 1083 0.4848 MVYRLYIIKVYPLRVGECPPVDLRIHSRAGRKTVVGRRGYGLWAMGYGHEIVMDGGAYGFMGKIESTPPFLLQKHISNSPDMDVCRNLSVSGECEQEQVLSPSCAKLSTFSTTLDDLFSSHNTEVDVDLEWLSVFVEDCFSSPASCLLAPTDVQASSTDSKPSRQLQKNQQKQSPLPNFVVPGKARSKRKRLSAPRTKDPRSIWSHHLNPQNEALASDPPLLKQTYWLADSELIVPKREDEDKENDGEAEHEEVGEKGIERKKENLGSLVSECEESSNGQNPMPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVLSSIPSEH 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2836 360 SMART GATA_3 281 335 IPR000679 GO:0006355|GO:0043565
Bisa07g2836 360 MobiDBLite consensus disorder prediction 154 217 - -
Bisa07g2836 360 Gene3D - 277 347 IPR013088 GO:0006355|GO:0008270
Bisa07g2836 360 MobiDBLite consensus disorder prediction 237 263 - -
Bisa07g2836 360 CDD ZnF_GATA 286 333 IPR000679 GO:0006355|GO:0043565
Bisa07g2836 360 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 282 345 - -
Bisa07g2836 360 ProSitePatterns GATA-type zinc finger domain. 287 312 IPR000679 GO:0006355|GO:0043565
Bisa07g2836 360 PANTHER GATA TRANSCRIPTION FACTOR 94 353 - -
Bisa07g2836 360 FunFam GATA transcription factor 276 357 - -
Bisa07g2836 360 Pfam GATA zinc finger 287 321 IPR000679 GO:0006355|GO:0043565
Bisa07g2836 360 ProSiteProfiles GATA-type zinc finger domain profile. 285 317 IPR000679 GO:0006355|GO:0043565
Bisa07g2836 360 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2836 Bisa-ChrBisa07 61086640 61092787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2836 101 349 C2C2-Gata Transcription Factor Family AT4G32890 39.689 7.44e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa07g2836 GATA 1e-14 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2655 03 40897994 40898845 Bisa07g2836 07 61086640 61092787 CCT