Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2828 ATGGAAGAGCCGGTAGTGGTGAACAAAGGAGAAGAACAACCTCTGGATTTGCCTCCGGGGTTTAGATTCCACCCCACGGATGAGGAGATCATTACTTTTTATCTCACAGAGAAGGTGCTGAATAGCAGATTCAGTGCAACCGCTATTGGAGAAGCTGATTTGAACAAGTGTGAACCTTGGGACTTACCCAAGAAAGCCAAGATGGGGGAGAAAGAGTGGTACTTCTTCTGCCAGAGGGATCGCAAGTATCCCACAGGCATGAGAACTAATAGAGCCACCGAGTCAGGATACTGGAAGGCCACCGGAAAAGACAAGGAGATTTTCAAAGGGAAAGGCAACCTCGTGGGGATGAAGAAGACCCTCGTCTTCTACAGAGGGAGGGCTCCGAAGGGAGAGAAGACCAATTGGGTTATGCACGAGTTCAGATTGGAAGGCAAATTCGCAACCTACAATCTCCCAAAAGCTGCCAGGGATGAGTGGGTTGTGAGCAAAGTATTCCACAAGAACACGGACATCAAGAAGAGCCCAATTCCAGGCCTTTTGAGGATCAACTCTCTGGGTGACGACTTGCTTGACTGTTCCTCTCTCCCACCTCTCATGGATCCTTCTCACACCAATTCTCACGCCCACACCCACAAGCACCCTCCCTATACCTCTGACCATGACTTCAAAGGCACCATCCCACCCCCTCCGTTAATCTCACCCAATTCCAGACCATCCGACGGCTATTATCTCCCCGACTTCTCCTTCGTCAACAACAATCAGCAGATTCCGATGAAGCCACAAGACCACAAGACCTATGACATGACCACCCACAATAATTACACCCCCAACCCCAATCAACCCAATTTCCCCAATCCCCAAATCCAAATCCAGAATAACCAGATTTTCTGCTTTCAACAGGATCCTCCTATTTATGTTGCACCTAATAACAATGATGATGGCACATTAATTAGGCTGGAGAAGCAGTGCAAGATGGAGCAGTTGTCGTCTACCAATCACTCTGTGGTGAGCGCGTCGCAGGACACGGGGGGGCTCAGCAACGACAGAAACACCGATACTTCTTCGGTCGTTTCGAAGCTGGACATGAGAATAAGGAACAAGTTTTACGATGATCTTGAGGGTCCCTCGGTTGGACCCCTTTCGGATTTGGAATGCCTCTGGGATGACTACTGA 1176 0.4923 MEEPVVVNKGEEQPLDLPPGFRFHPTDEEIITFYLTEKVLNSRFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFATYNLPKAARDEWVVSKVFHKNTDIKKSPIPGLLRINSLGDDLLDCSSLPPLMDPSHTNSHAHTHKHPPYTSDHDFKGTIPPPPLISPNSRPSDGYYLPDFSFVNNNQQIPMKPQDHKTYDMTTHNNYTPNPNQPNFPNPQIQIQNNQIFCFQQDPPIYVAPNNNDDGTLIRLEKQCKMEQLSSTNHSVVSASQDTGGLSNDRNTDTSSVVSKLDMRIRNKFYDDLEGPSVGPLSDLECLWDDY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2828 391 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Bisa07g2828 391 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 285 - -
Bisa07g2828 391 MobiDBLite consensus disorder prediction 202 239 - -
Bisa07g2828 391 MobiDBLite consensus disorder prediction 330 354 - -
Bisa07g2828 391 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Bisa07g2828 391 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Bisa07g2828 391 FunFam NAC domain-containing protein 100-like 26 172 - -
Bisa07g2828 391 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2828 Bisa-ChrBisa07 60903990 60905508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2828 1 389 NAC Transcription Factor Family AT5G18270 51.741 1.40e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa07g2828 NAM 9.5e-40 No_clan