Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2807 ATGCTCCTAGCTAATGATGGTGATCCAGTAAATTTCGCTTTGTCTCCAGTCAAGCTACTTAAAGTGAGGTGTGAGGTAGAAAGGAAACGGGGATCGAGAGTCTCACCCAAGAGTTCATCAAAGAGACTAGTCTTCCCATTATCACCAACAATGGCTGATGGTCATGAATCAGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAAAGCATTGGAATCTGCTAGAGGCAATGGTACCAGCATGATTTCCCTCATTATGCCTCCGCGTGATCAAATATCCAGGGTCACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATAAAGAGCAGGGTGAACCGACAGTCAGTGTTGGGAGCCATTACTTCTGCACAACAGAGGTTGAAGCTCTATAATAAGGTTCCTCCAAATGGTTTGGTTCTTTATACGGGAACCATTGTCACTGAAGATGGCAAGGAAAAGAAGGTGACAATTGATTTTGAACCTTTTAAGCCTATCAATGCATCACTGTACCTCTGTGATAACAAGTTTCACACAGAAGCCCTGAATGAACTTTTAGAATCTGATGACAAGTTTGGATTTATTGTTATGGATGGAAATGGAACCCTTTTTGGGACGTTAAGTGGAAATACTCGTGAGGTGCTTCATAAATTTACTGTTGATCTACCAAAGAAACATGGTAGAGGAGGGCAGTCAGCTCTTCGTTTTGCTCGTCTTCGCATGGAAAAACGGCACAACTATGTCAGAAAGACTGCAGAACTTGCTACACAGTTTTTCATCAATCCTGCTACTAGTCAACCTAATGTTTCTGGGCTTATACTTGCTGGTTCAGCTGACTTCAAGACGGAGCTGAGCCAGTCAGATATGTTTGATCCTCGTTTACAGGCAAAAATATTAAATGTGGTTGATGTTTCCTATGGCGGGGAAAATGGTTTTAATCAAGCTATTGAGCTATCTGCAGAGATCTTATCGAATGTGAAGTTCATTCAAGAGAAACGCTTGATAGGGAAATATTTTGAAGAGATCAGCCAGGACACTGGGAAATATGTCTTCGGAGTTGATGACACTTTGAAGGCTCTGGAGATGGGTGCTGTGGAAACACTTATTGTGTGGGAAAGTTTGGATATAAATAGGTATGTGCTGAAAAATAGTAGTACTGGTGAGATTGTCGTAAAGCACTTGAACAAGGAACAAGAGGCTGATCAAAACAACTTCCGAGATCCAGCCACCTCTTCAGAGTTGGAGGTTCAGGAAAAAATGCCCTTGCTTGAATGGTTTGCCAACGAGTACAAACGGTTTGGTTGCTCGCTGGAATTTGTGACCAACAAATCTCAAGAGGGATCACAATTTTGCAGAGGGTTTGGTGGCATTGGTGGTATCCTTCGCTACCAGCTTGACATCCGATCATTCGACGAGTTCTCCGATGATGAAGTGTATGAGGATTCTGACTAA 1461 0.4216 MLLANDGDPVNFALSPVKLLKVRCEVERKRGSRVSPKSSSKRLVFPLSPTMADGHESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWESLDINRYVLKNSSTGEIVVKHLNKEQEADQNNFRDPATSSELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEFSDDEVYEDSD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2807 486 Gene3D eRF1 domain 2 186 327 IPR042226 -
Bisa07g2807 486 Pfam eRF1 domain 2 194 327 IPR005141 -
Bisa07g2807 486 FunFam Eukaryotic peptide chain release factor subunit 1 186 327 - -
Bisa07g2807 486 Gene3D - 329 486 IPR029064 -
Bisa07g2807 486 FunFam Eukaryotic peptide chain release factor subunit 1 52 185 - -
Bisa07g2807 486 Pfam eRF1 domain 1 68 188 IPR005140 -
Bisa07g2807 486 SUPERFAMILY Translational machinery components 192 326 - -
Bisa07g2807 486 NCBIfam peptide chain release factor aRF-1 62 467 IPR004403 GO:0003747|GO:0006415
Bisa07g2807 486 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 56 190 IPR024049 -
Bisa07g2807 486 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 55 479 IPR004403 GO:0003747|GO:0006415
Bisa07g2807 486 FunFam Peptide chain release factor subunit 1 329 486 - -
Bisa07g2807 486 Pfam eRF1 domain 3 331 468 IPR005142 -
Bisa07g2807 486 Gene3D eRF1 domain 1 50 185 IPR024049 -
Bisa07g2807 486 SMART eRF1_1_2 55 190 IPR005140 -
Bisa07g2807 486 SUPERFAMILY L30e-like 328 470 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2807 Bisa-ChrBisa07 60632175 60637060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2807 51 486 Eukaryotic Initiation Factors Gene Family AT3G26618 91.514 0.0 832