Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2797 ATGGGTTACCCTGATGCCGATCAGGATAATTCATCAAAGAGTTCAGCGCTGGCCACTGACGGTGATGCGCCCACTGATGCAGGAGATGATGTCAAATTGAGGTCTAGGGACCAAAGAGAAGCTCTACCAGGAGAGCCAAAGTGCACTTTATGCGGCCGCTATGGAGAGTATATATGTGATGAAACAGATGATGATGTTTGCAGCTTGGAATGTAAACAAACATTACTATCCAGAATTACCCACTCTTCATTGCCTGTTAGTACTTGTCCATCTAAAAGGCTTGCTGCAAATGATGAGTGCTTTTATGTTAGGGATACTGATTATGAATCGAGTGCTCCATCCTCAACCAGAGACCAGGCTGATATGCTTAGAAAAAAGCTTGACATTTATGTAAAGGGTGATGTGGTAGCACCAATTTTATCATTTGCATCCTGTGACCTTCCTGACAAGCTCCTCCACAATATAGAAGCTGCAGGATATGACATGCCTACGCCTGTCCAGATGCAAGCAATCCCAGCTGCATTGATAGGCAAAAGCATGCTTGTTTTAGCTGATACAGGATCTGGAAAATCTGCTTCATTTTTAATTCCAATAGTTTCTCGTTGCGCAAGATATCGCCTTGAGCATGTTTCTGACAAGAAGAAGCCATTAGCTATGGTGTTAACACCTACTAGAGAGCTCTGTATACAGGTTGAAGAGCATGCTAAATTGCTTGGAAAGGGATTGCCTTTTAAAACTGCACTTGTTATTGGTGGTGATGCCATGGCTGGACAACTCTATCGCATTCAGCAAGGAGTGGAACTGATTGTGGGAACCCCAGGAAGGCTTGTTGATCTTTTAACAAAGCATGATATTGACTTAGATGATATAATGACATTTGTTGTGGATGAGGTGGACTGCATGCTGCAAAGGGGTTTCCGAGATCAGGTCATGCAGATATACAGGGCTATGTCCCAGCCCCAGGTCTTGATGTATTCTGCAACAATCTCACATGAGTTAGAGAAGATGGCGAACTCTCTGGTGAAAGGTACTGTGGTTATATCTGTTGGTGAGCCTAATAGACCAAATAAAGCTGTGAAGCAGCTAGCTATTTGGGTTGAGTCAAAGCAAAAGAAACAAAAGCTGTTTGACATTTTGGTGAGTAAGCAGCATTTTAAGCCACCTGCTGTCGTATATGTGGGGTCCAGACTTGGGGCAGATCTCCTGGCCAATGCTGTTACAGTCACCACTGGAATAAAAGCACTGTCAATTCACGGGGAGAAGTCTATGAAGGATAGAAGAGAAATAATGAGGTCCTTTTTTGTGGGTGAGGTCCCAGTGGTTGTGGCTACTGGAGTTTTGGGTAGGGGGCTTGATCTATTGGGTGTAAGACAGGTAATTGTGTTTGACATGCCTAATTCCATTAAGGAATATGTACATCAGATTGGAAGGGCTTCTAGGATGGGAGAGGAAGGTCAAGCCATTGTTTTTGTGAATGAGGAGAATAAGAATGTCTTTGCAGAGTTGACTGAAGTTTTGAAAGCTGCTGGGGCAGCTGTGCCTCGGGAGCTTGTCAATTCACGGTATACCAAGGGATTTATCTCTGGTGGCAAGGCTCCAAAAAAGAGGAAGAATAGATCGTAA 1623 0.4387 MGYPDADQDNSSKSSALATDGDAPTDAGDDVKLRSRDQREALPGEPKCTLCGRYGEYICDETDDDVCSLECKQTLLSRITHSSLPVSTCPSKRLAANDECFYVRDTDYESSAPSSTRDQADMLRKKLDIYVKGDVVAPILSFASCDLPDKLLHNIEAAGYDMPTPVQMQAIPAALIGKSMLVLADTGSGKSASFLIPIVSRCARYRLEHVSDKKKPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVIGGDAMAGQLYRIQQGVELIVGTPGRLVDLLTKHDIDLDDIMTFVVDEVDCMLQRGFRDQVMQIYRAMSQPQVLMYSATISHELEKMANSLVKGTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILVSKQHFKPPAVVYVGSRLGADLLANAVTVTTGIKALSIHGEKSMKDRREIMRSFFVGEVPVVVATGVLGRGLDLLGVRQVIVFDMPNSIKEYVHQIGRASRMGEEGQAIVFVNEENKNVFAELTEVLKAAGAAVPRELVNSRYTKGFISGGKAPKKRKNRS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2797 540 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 171 347 IPR014001 -
Bisa07g2797 540 Pfam Helicase conserved C-terminal domain 374 482 IPR001650 -
Bisa07g2797 540 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 104 520 - -
Bisa07g2797 540 MobiDBLite consensus disorder prediction 25 39 - -
Bisa07g2797 540 Gene3D - 350 523 IPR027417 -
Bisa07g2797 540 SMART ultradead3 159 362 IPR014001 -
Bisa07g2797 540 MobiDBLite consensus disorder prediction 1 39 - -
Bisa07g2797 540 Gene3D - 27 83 - -
Bisa07g2797 540 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 358 521 IPR001650 -
Bisa07g2797 540 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 140 168 IPR014014 GO:0003724
Bisa07g2797 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 349 IPR027417 -
Bisa07g2797 540 SMART helicmild6 400 482 IPR001650 -
Bisa07g2797 540 Pfam DEAD/DEAH box helicase 164 335 IPR011545 GO:0003676|GO:0005524
Bisa07g2797 540 Pfam HIT zinc finger 46 72 IPR007529 -
Bisa07g2797 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 496 IPR027417 -
Bisa07g2797 540 Gene3D - 106 349 IPR027417 -
Bisa07g2797 540 FunFam DEAD-box ATP-dependent RNA helicase 41 28 85 - -
Bisa07g2797 540 CDD SF2_C_DEAD 359 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2797 Bisa-ChrBisa07 60555271 60557329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2797 129 504 Eukaryotic Initiation Factors Gene Family AT3G19760 28.084 4.50e-53 184