Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2789 ATGGAGGACTTAGGCCTCAAATATGTGAAGGCAACAGCTAGTGACCTCATTTACTTCGATATTTCACTTTTAAAATCATCTTCACTTTATGAGTCTGGAAATGATCACTGTTTCTTGTCAAATCCCTTAGGATTCACTTTTTGCTTCCAGAAAGGCGCAAACATTCTCTATCCCTTCTCATTCTTTCTGTCATGGTTTACATCTTTATTGAAACAGCCTCGTAAGAAAGTTGAAGATGCTAAGCTAGCGAAAGATTTTCAAACCACATTGCAAGAGTTCCAGAAAGTTCAACAGCTTGCTTCTGAGCGCGAGTCCGCCTACATCCCTTCTTCTTCTTTACCATCAAGCTCTGTCTCTGGTGAAGAATCGATTGAAACAGATGTGGAAAGCCAAACTTTTATGAGGGCGCAGAAGAGGCAGGAAATACTTTTACTGGAAAACGAGATGGCGTTTAACGATGCCATGATTGAAGAGAGAGAACAGGGCATTAAAGAGGTAGAAGAGCAAATACTACAAACCAGTGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGAACAAGGGGTAGTTATTGATGACATTCAATCAAATATTGATTCCTCTGCTGGTGCAACCACCCAAGCTAAAACTCAGTTAGCCAAGGCTTCCAAAAGTGTGAAATCCAGATCCTCATGGGAAGCTACTTGCTCCTACCCCTTGTTGTCAATGGCGGCCATTTTGTACAACGTGCTTTCATCTGCGGGTTTGGTCTCACTGGGTCTCTACCATCTTGTCGCCGCCATCATCTTCCACCTGAAATCCCCTCATTCATACTCTGCCAAACCCGTCCCCCCCTTCCCTCCCTATTCCTCTTCCTCCTCCTCCTCCCCCCACCACCACTACCACCGCCTTCGTCACCTCCCACTCTGCCTCATCATCTTTTCCCTCCTCGTCTCTTTCATCTATCGGCTTATCATTTCCTTTGAAATGGACCCTCTCGTCAAAGGCCACACACCGGTTCATCATTTTGTCTCTCTCCAATCCGCCGCCGTTCTCTTCCTCTTCCTCATCCTCACCGTCTCTCTCCTCTTATCGGAAACCTCCTTCTTTGTTCCCTTCTCCACCGATCTCATTTTCGCTCTTGCTTCTGTTCTCTTCTTCTTGCAATACTCCGTCTCTGCCGCCACCGCCTCGGTCCAAATTTCCGATCTCGAGGCCAAATGCGACTCCGTTTCTGCCAGGATTTCCGCTTTCACGGCGCTTCTGTGTCTAGTTCTTGCTTTTCAGCCCAAGATCTTTGTCGCGGATGTTGGCTTGGGAGCTGCTATCTGCTTGCAGGGTCTCTGGGTTTTCCAAACCGGGTTGTCTCTCTATGTTGATGCATTTATCCCCGAAGGGTGTCATCGTCTGCTTGATGTGATTGATGGGGTTGAGGGATCAACCAAGTGTGAACTCGAGGTATCCAAGTTGAGAGCTGTGGCTGTTCTGGATCTCATTTTTTTAGTCCATGTTATGTTTGTGCTGTTCATTGTCATGATCACTTATGCTGGCGTTGCAAAGAGTGTGGGCGTCAAGAGATTGAGCTCCTATGACAGCTTGCCCAACATTATTTCCCATTCAGAAAACAGTGGTCTTATCCAGATGAAATCATTAGAGGGCACGCAGGCTTGA 1650 0.4648 MEDLGLKYVKATASDLIYFDISLLKSSSLYESGNDHCFLSNPLGFTFCFQKGANILYPFSFFLSWFTSLLKQPRKKVEDAKLAKDFQTTLQEFQKVQQLASERESAYIPSSSLPSSSVSGEESIETDVESQTFMRAQKRQEILLLENEMAFNDAMIEEREQGIKEVEEQILQTSEIFKDLAVLVHEQGVVIDDIQSNIDSSAGATTQAKTQLAKASKSVKSRSSWEATCSYPLLSMAAILYNVLSSAGLVSLGLYHLVAAIIFHLKSPHSYSAKPVPPFPPYSSSSSSSPHHHYHRLRHLPLCLIIFSLLVSFIYRLIISFEMDPLVKGHTPVHHFVSLQSAAVLFLFLILTVSLLLSETSFFVPFSTDLIFALASVLFFLQYSVSAATASVQISDLEAKCDSVSARISAFTALLCLVLAFQPKIFVADVGLGAAICLQGLWVFQTGLSLYVDAFIPEGCHRLLDVIDGVEGSTKCELEVSKLRAVAVLDLIFLVHVMFVLFIVMITYAGVAKSVGVKRLSSYDSLPNIISHSENSGLIQMKSLEGTQA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2789 549 Pfam Syntaxin 80 188 IPR006011 GO:0016020
Bisa07g2789 549 SUPERFAMILY t-snare proteins 76 208 IPR010989 GO:0016020|GO:0016192
Bisa07g2789 549 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 153 215 IPR000727 -
Bisa07g2789 549 CDD SNARE_Qa 156 214 - -
Bisa07g2789 549 Gene3D - 63 112 - -
Bisa07g2789 549 PANTHER OS11G0534100 PROTEIN 236 549 - -
Bisa07g2789 549 SMART tSNARE_6 148 215 IPR000727 -
Bisa07g2789 549 Gene3D - 146 246 - -
Bisa07g2789 549 Pfam Family of unknown function (DUF716) 369 509 IPR006904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2789 Bisa-ChrBisa07 60482029 60489774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2789 73 229 SNARE and Associated Proteins AT5G46860 55.625 1.61e-50 173