Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2767 ATGAGAAAAGCCAAGATTTCAGCTTTCCTTTATACCCATCACTATCTCATCATCAGACCCAAATTACACAAGAATCTTCACCCTATCCCTTTCCCTATCATACCACCACCACCTTCCCAATCCCACAAAAAAAGACACTATAGAGGAGTTAGGCAGAGGCCATGGGGAAAATGGGCGGCGGAAATTCGAGATCCTAAGAAGGCAGCGAGGGTGTGGCTTGGCACGTTTGACACGGCGGAGGATGCGGCGGCAGCTTATGATGCTGCCGCATTGAGGTTCAAAGGCAACAAAGCCAAGCTCAATTTCCCCGAACGCGTTGCTAATTTTCCGAACTCTTCGGCTCCTCCTCCTCCGATGTCGTCCGAGGCGGCGGCACCACCGTCGGCTTCTCAACAACCTCCTTTGCCGGACGAGGGGTTCCCGAACCTAATGCAGTACGCTCAGGTGCTTTGTAGTAGGGACGATGATGATCTACAACGTGCTGCTTCGGGGCTTTATTATCACAATGTTAGTAATGATCCATTTGTTTATGATTCTTCTTCTTTCTTCTCGTCATCGGCTTCGTCACCTTCTTCATACATGGCTGGGTCTGATCGGTCTGATCAACTTCGGGGTGAACAAATGGGAGATCGCGGTTCTTCTGGTTCTTATTTTTTTGATGAAGGAAGTGAATTTGATGGAAGCTACACGAGGCGATGA 699 0.4907 MRKAKISAFLYTHHYLIIRPKLHKNLHPIPFPIIPPPPSQSHKKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAAAYDAAALRFKGNKAKLNFPERVANFPNSSAPPPPMSSEAAAPPSASQQPPLPDEGFPNLMQYAQVLCSRDDDDLQRAASGLYYHNVSNDPFVYDSSSFFSSSASSPSSYMAGSDRSDQLRGEQMGDRGSSGSYFFDEGSEFDGSYTRR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2767 232 MobiDBLite consensus disorder prediction 110 134 - -
Bisa07g2767 232 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 MobiDBLite consensus disorder prediction 183 232 - -
Bisa07g2767 232 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 PANTHER DNA-BINDING DOMAIN 40 178 IPR044808 GO:0003700|GO:0009873
Bisa07g2767 232 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Bisa07g2767 232 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 MobiDBLite consensus disorder prediction 183 198 - -
Bisa07g2767 232 FunFam Ethylene-responsive transcription factor 2 45 104 - -
Bisa07g2767 232 Gene3D AP2/ERF domain 45 106 IPR036955 GO:0003700|GO:0006355
Bisa07g2767 232 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Bisa07g2767 232 MobiDBLite consensus disorder prediction 106 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2767 Bisa-ChrBisa07 60050521 60051917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2767 43 166 AP2-EREBP Transcription Factor Family AT5G13330 55.303 1.61e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g2767 AP2 1.2e-14 CL0081