Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2761 ATGGAATTGATAAAGAAACCTCGCCTGCTCACATTGACGAACCTTCCCTTTCCTTCCAAAATTTTCATGTCCATCTTGCCCTCACAAACCCAGGCATCAACGTCGTCCTCTTCTCAATCTCCTTTATCTCCAAACCCTAACTCCCAGCATGGCAACCTCCTTCACCCACCTTCTCCTTCCTCATCCTTCTCATCTCCTTCATTTCAAATTCAGTCATTCGGATCTCTCCGGGTCTCCGATTTCCAATCTCCCGTCGCTATGCCCGACGTCAATTCAGGTTCATCAACTCCAGCTTCAGAAGATTCTGGTGGACCTTCCGAAAAGGTAACAGAGTTAGGATCTCCAAGTGGTATGAAGACTTTTCCTCAACAAAACTCTAGAACGCAATCTAGGAGTTACTCAGGAAGACGGGCAGTTAGATCATCCCAGTCAGCAAGGAAGACAGCAGGAACAGTTGTTTCTCCTGGAGATCAACAAAATGCTGGGTTTGCAAATTCTCATGGGAGCACCCCTTCAGCAGGAAGAAAATCTCAGATGGTTAATGGTAATTACTTGCTAAACTTTCAGTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCTCCCCCACCAAGAAGGCAGCAGAAGAAAAAACCGTACAACAAAGATTTATTTTTACAGGCCAATTACAAATTCATGGTGTTAGATTCAGGAAACTATTCACCTGAGACTTTGGACCCAGATAAAATGTTACAGTGGGAAGATATTATATGTGTGAGGTATTCCACCCCATTTTCAGTTCAGTGTCCTATATGTTTGGAGTATCCTCTGTGTCCGCAAATAACCTCCTGTGGACATATTTTTTGTTTCCCATGTATCTTACAATATTTGATGATGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCCCTATGCTTTGTGATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAACGTTAAGCAATATCAAGTGGGAGATAATGTTGAGTTCAGACTTTTAACTCGAAAAAAGGATTCCTTTACCCTGTCTCATAAAAATAAACAAGAGACTGATGTCATATCATGTGATCCCTTTTCCAAGTTCACACTCACATCTGATGTAGATCTCTCAGTGAGACAGGCAATATCAGATCTAGATGGTTGGCTGGCTAAAGCTGATTCTGGTCTTGTTGACGACTTAGGGAAACTTCCATATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAAGTATTGGAAAGAGCACAGGGCTTGTGATGGTGACAGTTCCCCTAGACTATTCAATTTTGGATATAACAAACCATCAATAGCTGTAAATGCTACTGATGTTGATGATGAAACCCATTCTAATGGAGCAGGAACTTCCTCTGCTGATTTCCATGACCAAAGTAAGGGTAGAATATTGGATAAGTCAAATAGAGGGGGAGCCTGTCCAGATCAAACTGTGGATGTCAAGAAAGTACTAGGGCAAGAAATGAATTTATCATCTTCCTATGAGGAGAAAAGTGATTTTCAAAGGCATTCAAATGGTTTTGGAGATGCAAAGGACAGTGATGCGTACAATTTCTACCAGGCTGCTGATGGTCAGCATCTCATTCTTCATCCCCTGAACATGAAGTGCCTACTTTACCATTACAGGAGCTATGATATGCTTCCACACAGAATAAATGGAAGGATTCTGCAATTGGAGACAGTCACTCAGTCAGAGGCCATAAGGAGGCGGTACCGATATTTGAGTCACTTTCCTTTAACAACGACATTCCAGCTTTGTGAAATTGATTTGAGTGAGATGTTGCCTTCGGAATCATTGGCTCCATTCATGGATGAAATAAATAAGCGTGCAAATCAGAGGAGACAACTTGCAAAGAAGGAAAGGAAGGAGAAAATCAAGGCTGAAGCTGCTTCTGCATATTCTCTTCCCATACAATCCAGCTTTCAACTTACGTCTCGTGACAGTTCTCCCACATTCTCCATGGATGATTTTGAAGCCTTGGGAAATTCAGCTGTGTCATCAAGTCCTCCAGTTGTTGGGGGAAGAAATTTGTTTTCAAATGTTACAAGGCTTGGTTTTGCCGCTGGTCATGATTCTCCATCCTTAAACATTCAAGAAACTAATGGTCTACATAATCACAATATGACAAGTGAGGCTTCTGGCACAACAGGTTTGAGAAATGTGGAGACACCATCATTTGCCAATGTTATATCTAGAGCAGAGTCTGTGAATAGCTTGAATGCACCCAAGACAACTGACTTGGGTAAGAAGGGGAAGAAACCAACTCGAGTTCTTCTGTCAACAGCTGGTGGTAGGCGTTATTGA 2343 0.4213 MELIKKPRLLTLTNLPFPSKIFMSILPSQTQASTSSSSQSPLSPNPNSQHGNLLHPPSPSSSFSSPSFQIQSFGSLRVSDFQSPVAMPDVNSGSSTPASEDSGGPSEKVTELGSPSGMKTFPQQNSRTQSRSYSGRRAVRSSQSARKTAGTVVSPGDQQNAGFANSHGSTPSAGRKSQMVNGNYLLNFQYDPISRPQARGPPPPPPRRQQKKKPYNKDLFLQANYKFMVLDSGNYSPETLDPDKMLQWEDIICVRYSTPFSVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMISAKDLYTIYIENVKQYQVGDNVEFRLLTRKKDSFTLSHKNKQETDVISCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLGKLPYVCAAMQQLEQRKKYWKEHRACDGDSSPRLFNFGYNKPSIAVNATDVDDETHSNGAGTSSADFHDQSKGRILDKSNRGGACPDQTVDVKKVLGQEMNLSSSYEEKSDFQRHSNGFGDAKDSDAYNFYQAADGQHLILHPLNMKCLLYHYRSYDMLPHRINGRILQLETVTQSEAIRRRYRYLSHFPLTTTFQLCEIDLSEMLPSESLAPFMDEINKRANQRRQLAKKERKEKIKAEAASAYSLPIQSSFQLTSRDSSPTFSMDDFEALGNSAVSSSPPVVGGRNLFSNVTRLGFAAGHDSPSLNIQETNGLHNHNMTSEASGTTGLRNVETPSFANVISRAESVNSLNAPKTTDLGKKGKKPTRVLLSTAGGRRY 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2761 780 SMART ring_2 264 310 IPR001841 -
Bisa07g2761 780 SUPERFAMILY RING/U-box 263 316 - -
Bisa07g2761 780 MobiDBLite consensus disorder prediction 28 68 - -
Bisa07g2761 780 PANTHER RING FINGER 10 FAMILY MEMBER 92 780 IPR039739 -
Bisa07g2761 780 ProSitePatterns Zinc finger RING-type signature. 279 288 IPR017907 -
Bisa07g2761 780 ProSiteProfiles Zinc finger RING-type profile. 264 310 IPR001841 -
Bisa07g2761 780 MobiDBLite consensus disorder prediction 192 215 - -
Bisa07g2761 780 CDD RING-HC_RNF10 262 319 - -
Bisa07g2761 780 MobiDBLite consensus disorder prediction 84 177 - -
Bisa07g2761 780 Coils Coil 616 640 - -
Bisa07g2761 780 Pfam Zinc finger, C3HC4 type (RING finger) 264 310 IPR018957 GO:0046872
Bisa07g2761 780 MobiDBLite consensus disorder prediction 753 780 - -
Bisa07g2761 780 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 325 IPR013083 -
Bisa07g2761 780 MobiDBLite consensus disorder prediction 116 177 - -
Bisa07g2761 780 MobiDBLite consensus disorder prediction 84 103 - -
Bisa07g2761 780 FunFam RING finger protein 10 257 325 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2761 173 730 C3H Transcription Factor Family AT3G26730 57.241 0.0 642