Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2748 ATGATGATGGATCAGGGAGACAATCTGCTTCGCAAAAACGAGGCCTGTGCCTTGATGGCAGGTGTTGAGGCTGAGCTTGGGCTTGTCGCAATGGCAGGGGACACCCACATAAATCCCGGGTCGGGCCGTCCGATCCACGACCTTGTCGCTGCCGTCACCACTACCCTCGGGACCGTTCAAAGAAAGAAAAGGATGGCCAGGCAGAGGCGATCCTCTACTCTCTCCACGATGCACCTCCCTCCTCCGCCATCCCCTCCTCCTCCTCCCTCCACATCCTCGCACGTGCCTCTATCCCCGACTCCGTCTTATAATCCCCTCCCTCCCCCACGTGAAATTGATCATAAGAGGTTGAGATTCCTTTTTCAAAAGGAGCTAAAGAACAGTGATGTCAGTTCCCTCCGAAGAATGGTACTCCCGAAGAAAGCAGCAGAAGCTTTCCTTCCTGTTCTCGAGTCTAAGGAAGGAATTTTTATCAACATGGATGATATGGATGGTCTTCATGTGTGGAGCTTCAAGTACAGGTTCTGGCCTAACAACAACAGTCGGATGTATGTACTTGAAAACACCGGGGAATTTGTTAGCACACATGGCTTAAGACTTGGAGATTCCATCTTGGTTTACCAAGATAATCAAACTCTTAATTATGTGATTCAGGCTAAAAAGGCTTCTGAACAAGACGATTTCATGGGCGTAGCGAGTGATAGCATAAGCGACATCTTTCTACACGATTACGACGTTAACAAATCCAACAGCCTGAGCGTGATGGCCTATCCCACAATGAACGACACAGACATGTCATTCATCTATGAAACAACCTTCTCGTCAAATGACTCACCACTTGATTTTTTGGGTGGATCAATGACCAGTTTTTCAAGGACTGGACCAGTCGAGACCTTTGGCTCTGTCGAGAATTTGTCACTTGATGACTTCTACTAA 936 0.4808 MMMDQGDNLLRKNEACALMAGVEAELGLVAMAGDTHINPGSGRPIHDLVAAVTTTLGTVQRKKRMARQRRSSTLSTMHLPPPPSPPPPPSTSSHVPLSPTPSYNPLPPPREIDHKRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPVLESKEGIFINMDDMDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSILVYQDNQTLNYVIQAKKASEQDDFMGVASDSISDIFLHDYDVNKSNSLSVMAYPTMNDTDMSFIYETTFSSNDSPLDFLGGSMTSFSRTGPVETFGSVENLSLDDFY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2748 311 SMART B3_2 121 223 IPR003340 GO:0003677
Bisa07g2748 311 Gene3D - 117 232 IPR015300 -
Bisa07g2748 311 MobiDBLite consensus disorder prediction 57 109 - -
Bisa07g2748 311 CDD B3_DNA 119 221 IPR003340 GO:0003677
Bisa07g2748 311 Pfam B3 DNA binding domain 121 219 IPR003340 GO:0003677
Bisa07g2748 311 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 59 227 IPR044800 GO:0003700
Bisa07g2748 311 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Bisa07g2748 311 SUPERFAMILY DNA-binding pseudobarrel domain 119 218 IPR015300 -
Bisa07g2748 311 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2748 Bisa-ChrBisa07 59796724 59799488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2748 22 311 B3 DNA Binding Superfamily AT3G26790 49.844 2.02e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa07g2748 B3 6.9e-15 CL0405