Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2736 ATGCCTTCCCCATCTTCCCGATTCTCCCCTTCTTCCCTCACAGATTCGCCCTGCTCTGAACTCTTCAAAGTTTGGACCTTTTTCTTTCATTACATCATCCTTATTCCTTATTCCTCTCCGTCGAATTTGGATTACCACAGCAGAAGGATGCCCGTACTCTGCGACTCCTGCGACTCCAAAACGGCGGTGCTTTACTGTCGAGCTGACTCAGCCAAGCTCTGTTTGCTCTGTGACCACCTCGTCCACTCCGCCAATGCTCTCTCCCTCAAGCATCTCCGTTTTCAGATTTGCGACCACTGTCAAAACGACGCCGCCACGAATCGATGCTCCATCCACAACCTCCTCCTATGCAACGACTGTGATTGGAACGCTCACACCTTCTCTTCGGCTTCCTCACTCCACGAACGCACCGCTCTCGAAGGTTTCTACGGCTGCCCCTCCGTCGTCGAACTTGCCTCCTTACTCGGCCTCGTTTTCAAACCCAGAGATTTGGGTCGTTCAGAACTTTGTGGGTCTCGTCCCAAATTCAAGGACTTAGAGGGATTTACAGTCCCAAATTTTGATTCCTCTGTTTCTTCCGTATTGTGTCAAGGTCAGAATTTGACGTGTGGAAAGCTTAAGGACGAGGTGTATGGGCAACTAGTGGAAATGGCTCGATTAGATAAAGATGGAGCTGAACTTGGTCCCGGAACTCCACCCAGTGGGCATGCTCAGGAGGGAAACGAAGATGACTTGATGAAGCAGCAAATTCCGTTCACTTCTTTGATGATTTTGCCAACTGATATGGAAATAAGAAATAACGGAAGTGAAGGAGATCTTCTGTGGGATTGTAATTGTAACCCCACATCTCAGGCAACCCAGGTGTGGGATTTTCAGTCAGGAAAATCTCGAGGTTATGGAGAACCCAACATAGTGGCATCTGATGATCTCGCGGAAGTTTCCTCGTTGATTCCAAACAAGTTGCAAAATGCATACAATACGAATTGCTCAACTATCGGTCATGATATTCTATCAAGATATATTAAATCAGACCAATCATCGTCAAGCCATGTGATGAAGAAAGAGGAGAAGAAGAAGCAGAGTGGTTGCACCGAGAAGGTGACAGTAATGGAGCATACAGTGGGTGGAAGTGATGTTAACAGTGTAAGAGGCAAGGTTAGCATGGAGGAGCTGGCAAAGAATAGAGGCAATGCTATGATACGCTACAAGGAGAAGAAGAAAACTCGAAGGTATGAAAAGCAAATTCACTATGAATCAAGGAAGGTGAGGGCTGACATGAGAAAGCGGGTGAAGGGGAGATTTGTGAAGGTGAGTGATACAACAACATGA 1329 0.4695 MPSPSSRFSPSSLTDSPCSELFKVWTFFFHYIILIPYSSPSNLDYHSRRMPVLCDSCDSKTAVLYCRADSAKLCLLCDHLVHSANALSLKHLRFQICDHCQNDAATNRCSIHNLLLCNDCDWNAHTFSSASSLHERTALEGFYGCPSVVELASLLGLVFKPRDLGRSELCGSRPKFKDLEGFTVPNFDSSVSSVLCQGQNLTCGKLKDEVYGQLVEMARLDKDGAELGPGTPPSGHAQEGNEDDLMKQQIPFTSLMILPTDMEIRNNGSEGDLLWDCNCNPTSQATQVWDFQSGKSRGYGEPNIVASDDLAEVSSLIPNKLQNAYNTNCSTIGHDILSRYIKSDQSSSSHVMKKEEKKKQSGCTEKVTVMEHTVGGSDVNSVRGKVSMEELAKNRGNAMIRYKEKKKTRRYEKQIHYESRKVRADMRKRVKGRFVKVSDTTT 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2736 442 ProSiteProfiles Zinc finger B-box type profile. 49 96 IPR000315 GO:0008270
Bisa07g2736 442 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 53 438 - -
Bisa07g2736 442 SMART bboxneu5 49 96 IPR000315 GO:0008270
Bisa07g2736 442 Pfam CCT motif 395 437 IPR010402 GO:0005515
Bisa07g2736 442 CDD Bbox1_BBX-like 53 96 - -
Bisa07g2736 442 ProSiteProfiles CCT domain profile. 395 437 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2736 Bisa-ChrBisa07 59716185 59718502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2736 52 439 C2C2-CO-like Transcription Factor Family AT2G33500 36.298 6.12e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa07g2736 CCT 5.6e-15 CL0281