Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2686 ATGGGGGAGGATTCCAGTCATCTTGAAGAAACAATAATCAATCACAGCATGGAAGAGGAAGCTGAGGGAGAAGAGAGAGACCCAGAAAGCAATCCACTAAATGAGCCACTGCTCAAGAGGAATCGGACGCTTTCTACCAATCCACTTGCTCTGGTTGGAGCCAAGGTTTCCTATATAGAAAGCTTGGACTATGAGATAAATGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCCAGAGTTCAAGTACTGCAATACATATTCTTGAAGTGGTCACTGGCTTTCCTGGTTGGACTTCTTACTGGTATTATAGCCACTCTCATCAATCTTGCTATTGAGAACATAGCAGGGTACAAACTTCTCGCTGTTGTTAAATACATCCACAAAGAAAGATACTTAGCAGGATTCATATACTTCACTGGTATTAATTTTCTTTTAACATTGGTTGCTGCTGTTCTGTGTGTGTGCTTTGCACCCACAGCAGCTGGACCTGGTATACCTGAAATCAAAGCTTATCTTAATGGCGTCGACACTCCCAACATGTACGGTGCTACGACATTGATAGTCAAGATAATTGGAAGTATTGGAGCTGTCTCTGCAGGCCTAGATTTAGGAAAGGAAGGGCCTTTGGTACATATTGGCAGCTGTATTGCTTCCTTACTAGGCCAAGGAGGCACTGACAAACACCGGATCAAATGGCGCTGGCTTCGATATTTCAACAATGATCGTGACCGTCGTGATCTTATTACCTGCGGTGCTTCTTCAGGAGTATGTGCAGCTTTCCGGGCTCCCGTTGGTGGAGTTCTGTTTGCTCTTGAAGAGGTGGCAACCTGGTGGAGAAGCGCTCTCCTCTGGAGAACCTTTTTCAGCACAGCTGTTGTGGTGGTAGTGCTGAGGGCCTTCATTGAAATTTGCAACTCTGGGAAATGTGGCCTTTTTGGCACAGGAGGACTGATCATGTTTGATGTGGGCAATGTCACGGTGAGATACCATGTGATGGATATTATTCCTATTGCACTCATTGGCATCATCGGTGGGGTACTGGGAAGCCTCTATAACTATCTTCTACACAAGGTCCTCAGAGTCTACAATCTCATCAATCAGAAGGGAAAAATGCATAAGCTCCTCCTCAGTCTTTCAGTTGCACTCTTCACTTCAGTGTGCCAGTATTGTCTCCCATTCCTGGCAAAATGCACCCCCTGTAATCCGTCACTTCCAGAGTCTACCTGCCCCACCAATGGACGATCTGGAAATTTCAAACAGTTCAACTGCCCCGCTGGCCACTACAATGATCTTGCTACTTTGTTGCTTACCACTAATGATGATGCTGTTCGAAACATATTCTCAACCAACACACCTCATGAATACCATCCATCTTCTCTCCTAATTTTCTTTGTACTCTATTGCATATTAGGATTAATTACTTTCGGAATTGCCGTGCCATCTGGGCTCTTCCTCCCAATCATCCTTATGGGCTCAGCTTATGGCCGCCTTCTTGGCCTCGTGATGGGACCTCATACAAAAATTGACCAGGGGTTGTTTGCTGTTCTTGGTGCGGCCTCCCTCATGGCTGGTTCAATGAGGATGACTGTATCCCTCTGTGTGATCTTCCTTGAACTCACCAACAATCTTCTGCTACTACCAATTACAATGATTGTTCTCCTAATAGCCAAAACCGTTGGAGACAGTTTCAACCCAAGCATCTATGAGATTATATTGCACCTAAAAGGCCTTCCTTTCTTGGATGCAAACCCTGAGCCATGGATGAGAAATCTCACAGTAGGTGAGCTTATTGATGTAAAGCCATCAGTAATTACCCTCAATGGAGTAGAGAAGGTGTCTCGTATAGTAGATGTCTTGAAAAACACTACGCACAATGGTTTCCCTGTTGTGGATGAAGGAGTAGTACCCCCAGCAGGACTGGACAATGGGGCAAAAGAACTGCATGGACTGATCCTAAGAGCACACCTTGTCCAAGCGCTCAAGAAGAAATGGTTCTTGAAAGAAAGAAGGAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTAGACCTGGCAGATAGAGAAGGGAATATTGAGGAGGTGGCTGTGACAAGGAAGGAAATGGACATGTATGTTGATTTACATCCTCTCACCAATACAACTCCCTTTACAGTTCTAGAGAGCATGTCAATGGCAAAAGCAATGGTTCTCTTCAGGCAAGTAGGACTTCGCCATATGCTTGTTGTGCCCAAGTATCAAGCATCTGGGGTATCTCCTGTAATTGGGATCTTGACCAGGCAAGACCTACTAGCCCACAACATTCTGACAGTCTTTCCTCACCTGGAAAAATCAAAGAGCAGAGAAAAGAGGAACTAA 2367 0.4504 MGEDSSHLEETIINHSMEEEAEGEERDPESNPLNEPLLKRNRTLSTNPLALVGAKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWSLAFLVGLLTGIIATLINLAIENIAGYKLLAVVKYIHKERYLAGFIYFTGINFLLTLVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGTDKHRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGTGGLIMFDVGNVTVRYHVMDIIPIALIGIIGGVLGSLYNYLLHKVLRVYNLINQKGKMHKLLLSLSVALFTSVCQYCLPFLAKCTPCNPSLPESTCPTNGRSGNFKQFNCPAGHYNDLATLLLTTNDDAVRNIFSTNTPHEYHPSSLLIFFVLYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGLVMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLDANPEPWMRNLTVGELIDVKPSVITLNGVEKVSRIVDVLKNTTHNGFPVVDEGVVPPAGLDNGAKELHGLILRAHLVQALKKKWFLKERRRTEEWEVREKFTWVDLADREGNIEEVAVTRKEMDMYVDLHPLTNTTPFTVLESMSMAKAMVLFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAHNILTVFPHLEKSKSREKRN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2686 788 MobiDBLite consensus disorder prediction 1 37 - -
Bisa07g2686 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 20 773 - -
Bisa07g2686 788 ProSiteProfiles CBS domain profile. 715 779 IPR000644 -
Bisa07g2686 788 CDD CBS_pair_voltage-gated_CLC_euk_bac 602 769 - -
Bisa07g2686 788 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
Bisa07g2686 788 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g2686 788 PRINTS Plant CLC chloride channel signature 433 449 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g2686 788 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g2686 788 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g2686 788 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g2686 788 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 CDD ClC_6_like 60 582 - -
Bisa07g2686 788 SUPERFAMILY CBS-domain pair 586 768 IPR046342 -
Bisa07g2686 788 SMART cbs_1 604 663 IPR000644 -
Bisa07g2686 788 SMART cbs_1 718 771 IPR000644 -
Bisa07g2686 788 Pfam CBS domain 717 767 IPR000644 -
Bisa07g2686 788 ProSiteProfiles CBS domain profile. 601 670 IPR000644 -
Bisa07g2686 788 MobiDBLite consensus disorder prediction 1 33 - -
Bisa07g2686 788 FunFam Chloride channel ClC3 83 400 - -
Bisa07g2686 788 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 569 583 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 481 501 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 513 529 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 PRINTS Chloride channel signature 531 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g2686 788 Gene3D - 585 774 IPR046342 -
Bisa07g2686 788 Gene3D Clc chloride channel 82 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2686 Bisa-ChrBisa07 58937579 58941252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2686 8 782 Ion Channels AT3G27170 80.000 0.0 1267