Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2684 ATGCTGAGTTTCTCGCATATTCCACGCCCAACTCACGTGACAAAATGCCCACCTGCCTTCCTTCCTTCCTCCGCCACCAAATTTGGCACTTCTCCAGTTGTCCTTCTCCTCAAGTCTTTTTTGCTCCACAGAAAAAGTGTGACGTCGACAGAGGGTCAAGCGATGCCGGAGGAGACCACGTCCATCGATTATGTCATGGAGGCTGCTTCCGGGCCCCATTTCTCCGGCCTCCGCCTCGACGGTCTCCTTTCCTCTCCACCTTCTTCATCCACTTCCTCTCCAGCTCATCGATTCTCTTCTTCTGCTTTTTCCTCTTTGGATTCCTCAACCCTACCCTCCGATTCTGCCCCCAAACGCCCCTTCGTTATCGGAGTTTCGGGAGGTACTGCTTCAGGGAAGACCACTGTATGTGATATGATCATCCAACAGCTTCACGATCACCGCGTCGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACGCCTGAAGAATCGGAGCGTGCGCACGAGTACAATTTTGATCATCCGGATGCTTTTGACACCGAGCAACTATTAGAATGTATGCAAGAACTCATTAGCGGTCACTCTGTCCAAGTCCCAATTTATGACTTTAAAAAGCACCAGCGGTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTCCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGATACAGTGGAGAGGGGTAGGGATATAAATTCTGTTCTTGAGCAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTACTTCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGAGGAGGTGATAATCATGTTGCTATTGATCTGATTGTGCAACATATCCACACAAAACTTGGTCAACATGATCTATGCAAAATATATCCGAACGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGACTTTGTATTTTATTCAGATCGACTTATACGTTTGGTTGTTGAGCATGGCCTAGGCCATTTGCCCTTTACTGAGAAGCAAGTGGTTACTCCAACAGGATGTGTCTATACCGGTGTTGACTTCTGCAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCCCTCCGAGCTTGTTGCAAAGGCATTAAGATAGGAAAAATTCTGATTCACAGAGATGGAGACGATGGAAAGCAGCTTATATATGAGAAGCTTCCCAATGATATATCCGAACGGCATGTCTTGCTTCTTGACCCCGTCCTGGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTACTCATTCAGAAAGGAGTTCCGCAATCACACATAATATTCCTGAATCTCATTTCTGCGCCTGAGGGAATCCATTGTGTGTGTAAGAGGTTTCCATCCTTGAAGATTGTGACATCAGAGATTGATGCTGCGTTAAATGAAGAGTTCCGCGTTATCCCAGGACTGGGCGAGTTCGGTGATCGCTATTTTGGAACTGACGACTAA 1626 0.4533 MLSFSHIPRPTHVTKCPPAFLPSSATKFGTSPVVLLLKSFLLHRKSVTSTEGQAMPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSTSSPAHRFSSSAFSSLDSSTLPSDSAPKRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECMQELISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGCVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIELLIQKGVPQSHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGLGEFGDRYFGTDD 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2684 541 CDD PRTases_typeI 397 512 IPR000836 -
Bisa07g2684 541 SUPERFAMILY PRTase-like 323 540 IPR029057 -
Bisa07g2684 541 FunFam Uridine kinase 117 323 - -
Bisa07g2684 541 Pfam Phosphoribulokinase / Uridine kinase family 122 308 IPR006083 GO:0005524|GO:0016301
Bisa07g2684 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 313 IPR027417 -
Bisa07g2684 541 Gene3D - 324 539 IPR029057 -
Bisa07g2684 541 Pfam Uracil phosphoribosyltransferase 338 539 - -
Bisa07g2684 541 CDD UMPK 122 320 IPR000764 -
Bisa07g2684 541 NCBIfam uridine kinase 120 320 IPR000764 -
Bisa07g2684 541 FunFam Uridine kinase 324 539 - -
Bisa07g2684 541 Gene3D - 116 323 IPR027417 -
Bisa07g2684 541 PANTHER URIDINE KINASE 108 449 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 195 210 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 150 161 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 266 277 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 252 262 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 288 301 - -
Bisa07g2684 541 PRINTS Uridine kinase signature 120 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2684 Bisa-ChrBisa07 58921167 58926470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2684 55 541 PRT Gene Family AT5G40870 86.037 0.0 852