Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2680 ATGGTTTGGCCATTAAGAGCCAGTTCATTGCTTCTTGCTATTGTTTTGGGTCATGGAGCCAGCGGCTTAGGATCTGCCTTGGCCTTGGCCATGGGTTTGCAGTACACGCACCATGTCATGAACCCAAGTTATGTGCATAGAAATGTAAAGAGCAGTAACATATTTCTAGATGAAGAATTTGGTGCCAAGCTAGGGAATTTTGGGATGGCAGGGTGTGTTGAGAATGACACTGAGGAAGAATTACCAGAGGAAGAGCATTTGGTAATGTTTGAAAGCTCATACAAGCCTCTAGTGAAGGCATTTGCAAACCATTCAAACCAGTGA 324 0.4414 MVWPLRASSLLLAIVLGHGASGLGSALALAMGLQYTHHVMNPSYVHRNVKSSNIFLDEEFGAKLGNFGMAGCVENDTEEELPEEEHLVMFESSYKPLVKAFANHSNQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2680 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2680 107 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 26 79 - -
Bisa07g2680 107 SUPERFAMILY Protein kinase-like (PK-like) 26 77 IPR011009 -
Bisa07g2680 107 Pfam Protein tyrosine and serine/threonine kinase 26 80 IPR001245 GO:0004672|GO:0006468
Bisa07g2680 107 Gene3D Transferase(Phosphotransferase) domain 1 19 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2680 Bisa-ChrBisa07 58877175 58877498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2680 29 102 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 47.297 4.37e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa07g2680 PK_Tyr_Ser-Thr 1.2e-05 CL0016