Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2672 ATGAGGCAGAGGCGCGAGAGGTTGTTGGAGATGATAAGACTGCATCGTCCAAGCTATCACCTATGTGCTACGGATCTTGCACTTGGCAAGCAAGTGGCAGCCATCGTAGGAACGATAACACACAACGAAGCAATTCTGGCAATTTTAAATAATAACACCAACAAGAACCTTCCCATCTTATCTCTCACTTCGCCCGTAGTGAGCACAGAGTCACCTTCAATTCGATTGCCATACTTCATTCAAGAGGGCACCGATATCATCCTTCACATTCGATGCTTCGCCGCCATTGTTGCGGAATTCAGGTTTCCAAAGGTGACGGCAATCTACGAACACAATAACGGGTTTTCCTCTGATCCAGGGATACTAACTCTCCTTTCTTATTCTCTTCGACTTGTTGGTTCTGAGATTGATGACCACTTAGCTTTGCCTCCACTGTCTTCTCTATCAAACCCAAAATTTACTATTGAAAAGGAGCTTAGCAGGCTCAGGAGCAATGGCAACAGGGTGTTCTTGATTGTGCAATCTTCCTTAGAGATGGCGAGTTTGCTTTTTGAGAAGGCGAAGCGAATGGGTATGATGGAGAAAGGATCGGTGTGGATTGTACCCGACGAGGTTGCTGGTCTCATTGATTCAGTCAATTCCTCTGTTATTCTCGACATGCAAGGTGTTATTGGATTTAGAACTCACTTCAATGAAATAAACGAGACACTCAGACAATTCAAATTCAAATTTCGAAGAAAATTTGCGTTAGAGTACCCTGAAGAAGAGAACCCTAACCCAAGCATCTTTGCACTTCGATCATACGATGCAACTTGGGCTATTGCTCAGGCAGCAAAGGTGTCACAAGGAAAGTTCTCCCAGAAAGAATTTTCAGAATGGATTCTGGCCAATAATTTTGAGGGACTAAGTGGCAAGTTTGGCCTAAAAAATGGAACAACGTCGCGAGCACAAGTGTTTAAAATAATTAATGTGATCGGGAAAAGCTACGTAGATTTGGCATTTTGGTCTCTGGCATTTGGTTTCTCTAAGAACCTTGTCACACAGCAGCTGATGGAGATGACTACAAGTAATGGTTCCACGGGAGATTTAGGTTCAGTTTATCGGCTAAGGGGCTTACTCTGGATTCCAAATGAGGAAAGAACATTGAAAATTGGTGTGCCGTCAAAAGGTGCCTTCACCCAATTTGTGAATGTGACTTATGATCAGAGCCGGAATGAAACTAAAGTCACAGGTTTCTCAATTGATGTCTTCGAAGCTGCTGTTAAACGCCTTCCTTATCACTTGCTATATTCATTTGTCCCCTTCAATGGCTCTTATGATGAAATGGTTCAGCAAGTCTACAAGAAGGACCTGGATGCTGCTGTTGGAGATACAGAGATAATGGCATATAGATATCGTTATGTATTATTTTCTCAACCATATGTTGAATCTGGCCTCGACATGGTAGTAACTGTGAAGCCCAATAAATCAAAAGAAACATGGATGTTTACGAATGCATTCACAAAAGAGATGTGGCTAATGATGGCAGCAATGCATATTTTCATTGGACTTATCATTTGGCTGATGGAACGGCAAGTTAATGAAGAACTGAGGGGGCTTGGGGCTATGCTTTGGTTTTTAGTCACTGTACTCTTCTATGCACACAGAGAACCAATAAGACATCCTTTGGCTCGAATTGTGTTGGCACCTTGGTTATTCATAATTCTTATAGTTGCGACAAGTTTTACTGCAAGTTTAACATCCATGATTACTACCAGTCAACTTAAACCATTAGATATCGAAACTCTTAAGAGGACAAATGCTCCTGTTGGATGTGATGGAAATTCATTTATTGTGAATTATTTGACAGAGGTACTAGAATTCAAGCATAAGAACATTCGTAGAATTGATTCCATAAGTGACTACCCTATGGCCTTTAAGAACAGGGATATTGAAGCAGCTTTCTTTGTTACTCCACATTCTAAAGTCTTCCTAGCTAAGTACTCATGCACAGGCTACATCAAAGCAGGGAACACTTTCAAGCTTGGAGGCTTTGGCTTTGTCTTTCCAAAGGGTTCCACCCTGGCTGGTGACATATCAGAGGCACTGTTGGATGTTATAGAGAGTGGAGAAGCACAACAGTTAGAAGACGATATGTTATCCACTGTCAGTTGCTCCTCTTCAGAAAGCAAGACCCAGCAAGAAGATGGATCATTAGATGTTCAACCTTTCCTTGGCCTATTTTGCATTTCTGCAACTATTGCTGTCCTCGCATGGTTATATTCCATCAAGGGTTTGGTGGTAAGCAAATTGAAGAAGTTGATGAACCGCGTACAAGAAACATTTTCACATTTCAGGATAATATGGAGATGGGCATGA 2358 0.4177 MRQRRERLLEMIRLHRPSYHLCATDLALGKQVAAIVGTITHNEAILAILNNNTNKNLPILSLTSPVVSTESPSIRLPYFIQEGTDIILHIRCFAAIVAEFRFPKVTAIYEHNNGFSSDPGILTLLSYSLRLVGSEIDDHLALPPLSSLSNPKFTIEKELSRLRSNGNRVFLIVQSSLEMASLLFEKAKRMGMMEKGSVWIVPDEVAGLIDSVNSSVILDMQGVIGFRTHFNEINETLRQFKFKFRRKFALEYPEEENPNPSIFALRSYDATWAIAQAAKVSQGKFSQKEFSEWILANNFEGLSGKFGLKNGTTSRAQVFKIINVIGKSYVDLAFWSLAFGFSKNLVTQQLMEMTTSNGSTGDLGSVYRLRGLLWIPNEERTLKIGVPSKGAFTQFVNVTYDQSRNETKVTGFSIDVFEAAVKRLPYHLLYSFVPFNGSYDEMVQQVYKKDLDAAVGDTEIMAYRYRYVLFSQPYVESGLDMVVTVKPNKSKETWMFTNAFTKEMWLMMAAMHIFIGLIIWLMERQVNEELRGLGAMLWFLVTVLFYAHREPIRHPLARIVLAPWLFIILIVATSFTASLTSMITTSQLKPLDIETLKRTNAPVGCDGNSFIVNYLTEVLEFKHKNIRRIDSISDYPMAFKNRDIEAAFFVTPHSKVFLAKYSCTGYIKAGNTFKLGGFGFVFPKGSTLAGDISEALLDVIESGEAQQLEDDMLSTVSCSSSESKTQQEDGSLDVQPFLGLFCISATIAVLAWLYSIKGLVVSKLKKLMNRVQETFSHFRIIWRWA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2672 785 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 756 IPR015683 -
Bisa07g2672 785 CDD GluR_Plant 380 713 - -
Bisa07g2672 785 Gene3D - 377 504 - -
Bisa07g2672 785 Gene3D - 89 257 - -
Bisa07g2672 785 FunFam Glutamate receptor 89 258 - -
Bisa07g2672 785 Pfam Receptor family ligand binding region 26 324 IPR001828 -
Bisa07g2672 785 Gene3D - 575 709 - -
Bisa07g2672 785 SUPERFAMILY Periplasmic binding protein-like I 22 341 IPR028082 -
Bisa07g2672 785 FunFam Glutamate receptor 493 624 - -
Bisa07g2672 785 SMART GluR_14 381 715 IPR001320 GO:0015276|GO:0016020
Bisa07g2672 785 Pfam Bacterial extracellular solute-binding proteins, family 3 406 710 IPR001638 -
Bisa07g2672 785 FunFam Glutamate receptor 377 492 - -
Bisa07g2672 785 SUPERFAMILY Periplasmic binding protein-like II 374 710 - -
Bisa07g2672 785 Gene3D - 577 676 - -
Bisa07g2672 785 Pfam Ligand-gated ion channel 711 745 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2672 Bisa-ChrBisa07 58753444 58757333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2672 30 753 Ion Channels AT5G11210 32.398 9.95e-109 350