Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2652 ATGGCATTATCCTCTTCTTCTTCCTCCCTACTCCCCCTGCTCTTGTTCACCGCTCTCTGCTGCTCTGCCTCTTGCTTTGAGTACCAAGTGGGTGGACCTCACGGCTGGGCTGTCCCTCCCCCCAACAACACCGCCCTCTTCAATCACTGGGCTTCCCTCAACAGGTTCCAAGTTTCTGACTCTCTCCGGTTCAAGTACAAGAAGGACTCGGTGATGGAGGTGGAGCAGGAAGGCTACAACACCTGCAATTCCAGTCACCCCCACATGTTCTCCAACGACGGCAACACCCTCTTCAAGTTTGACCACCCTGGCTCTTTCTACTTCATCAGCGGCGCCTCTGGACACTGCCACAAGGGTCAGAAGATGATCGTCAGGGTCCTCCCTCGCGACCTTCCTCACCTTCCACTCAACGCCTCTTCTGCCTTTCGTCTTCCATCTTCACTGCATGCCCTCTCTCCCAACTATCGCGGCGTTCCTTCTGCATCTTCTCTGTTGCAGGCAAAAATGGCGACGCGTTTAGTCAGAAGGTCGGTTTCTAGGGTTCTGTCATCGCCGGCATCCAAGTTACTGAGGGCCCGAGCCCACGCTTCCGAAGCTCAAGCTCAGCAGGTGGAGCCCAAAGCTCGCGACACCGCCGCCCTTAAGACGTTCCAAATCTACCGATGGAACCCGGAGAATCCATCGAAGCCTCAGCTTCAGGAGTACAAGATCAATCTCAAGGAGTGTGGGCCAATGGTCCTCGACGCCTTGATCAAAATAAAGAATGAGATCGATCCCACAGTCACCTTCCGCAGATCGTGCCGGGAGGGAATCTGTGGGTCCTGCGCCATGAACATTGATGGGTGTAACGGGTTGGCTTGCTTGACGAAGATCCCTTCTGGGCCTGAAACTATGATCACTCCTTTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTTGATATGACGAATTTCTACAATCAGTACAAGAGTATCGAGCCCTGGTTGAAGAGGAAGAACCCATCCCCGAACCCTGGGAAGGAGATACCTCAGAGCAAAAAGGACAGGGCTAAGCTCGATGGGATGTACGAGTGCATCTTGTGTGCCTGCTGTAGCACATCCTGCCCTAGTTACTGGTGGAACCCCGAGTCTTATCTGGGGCCTGCCGCGTTGCTCCACGCTAATAGGTGGATAAGCGACAGTCGTGATGAGTACACTAAGGAGCGATTGGATGCCATTAACGATGAGTTCAAGTTGTACCGCTGCCACACCATATTGAACTGTGCTCGCGCCTGTCCAAAGGGCTTGAACCCTGGAAAGGAAATCCAAAATATCAAGCGGCTTGAGCTGGGAGTTTCCTCTGCTTGA 1347 0.5345 MALSSSSSSLLPLLLFTALCCSASCFEYQVGGPHGWAVPPPNNTALFNHWASLNRFQVSDSLRFKYKKDSVMEVEQEGYNTCNSSHPHMFSNDGNTLFKFDHPGSFYFISGASGHCHKGQKMIVRVLPRDLPHLPLNASSAFRLPSSLHALSPNYRGVPSASSLLQAKMATRLVRRSVSRVLSSPASKLLRARAHASEAQAQQVEPKARDTAALKTFQIYRWNPENPSKPQLQEYKINLKECGPMVLDALIKIKNEIDPTVTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGPETMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPSPNPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLNPGKEIQNIKRLELGVSSA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2652 448 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 IPR006058 GO:0051537
Bisa07g2652 448 Gene3D - 315 447 IPR009051 GO:0051536
Bisa07g2652 448 NCBIfam succinate dehydrogenase and fumarate reductase iron-sulfur protein 219 439 IPR004489 GO:0006099|GO:0016491
Bisa07g2652 448 SUPERFAMILY 2Fe-2S ferredoxin-like 214 314 IPR036010 GO:0051536
Bisa07g2652 448 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 348 378 IPR017896 -
Bisa07g2652 448 FunFam Early nodulin-like protein 1 25 130 - -
Bisa07g2652 448 FunFam Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial 205 314 - -
Bisa07g2652 448 FunFam Succinate dehydrogenase iron-sulfur subunit SdhB 315 446 - -
Bisa07g2652 448 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 228 305 IPR001041 GO:0051536
Bisa07g2652 448 CDD OsENODL1_like 26 127 IPR041846 -
Bisa07g2652 448 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 IPR017900 -
Bisa07g2652 448 CDD fer2 246 280 IPR001041 GO:0051536
Bisa07g2652 448 Pfam 2Fe-2S iron-sulfur cluster binding domain 216 319 IPR025192 GO:0009055|GO:0051536
Bisa07g2652 448 Pfam 4Fe-4S dicluster domain 357 430 - -
Bisa07g2652 448 Gene3D - 25 130 IPR008972 -
Bisa07g2652 448 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Bisa07g2652 448 PANTHER SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN 205 442 - -
Bisa07g2652 448 Pfam Plastocyanin-like domain 45 120 IPR003245 GO:0009055
Bisa07g2652 448 Gene3D - 205 314 IPR012675 -
Bisa07g2652 448 SUPERFAMILY alpha-helical ferredoxin 315 440 - -
Bisa07g2652 448 SUPERFAMILY Cupredoxins 26 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2652 Bisa-ChrBisa07 58449142 58452697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2652 10 130 Phytocyanin Superfamily AT5G14345 53.719 1.77e-40 140