Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2628 ATGGCCTCCTTCGTCGGAGCACCGTCATCGTTTTCTCCTTCCAATTTCCTTCTCAAAAATTCACCATCCTCTTCCTCGTCGTACTCTACATCCACCCATCTCTTCTTTTACAGTCCCCATCTAAAACCCAAAACCCTATCTTTCAATCTCCCCGCCTCTTTCGTCTCCGGTGCCCCCATCTTCAGTTCCTCCGATTTTTATTCTTCTGCTCCCGGCGACTCCCATCGCCGGCGGCCCCTTGTCGTCCGAGCAGCCAAGGGAAAATTTGAGAGGAAAAAGCCACATGTTAACATTGGCACGATCGGTCACGTTGATCACGGGAAGACTACTCTCACGGCCGCTCTTACCATGGCTTTGGCCTCTATGGGGAATAGCGCGCCGAAAAAGTACGACGAAATCGATGCGGCACCGGAAGAGAGAGCCCGAGGGATCACGATCAACACCGCAACGGTCGAATATGAAACTGAGAGCAGACATTATGCTCATGTAGACTGTCCAGGGCATGCTGACTATGTGAAGAATATGATCACCGGTGCAGCGCAAATGGACGGTGCGATTTTGGTAGTTTCAGGTGCTGATGGGCCAATGCCTCAGACCAAAGAGCACATTCTATTGGCGAAACAAGTCGGTGTGCCCAATATTGTTGTCTTCTTGAACAAGCAGGACCAGGTTGATGATGAGGAGCTTCTTCAGTTGGTGGAATTGGAAGTTCGGGAGCTCCTGACTCTCTATGAATATCCGGGTGACGATGTGCCCGTTGTTTCGGGTTCGGCATTGTTGGCATTAGAGGCATTGATGGCCAACCCCAAAATCAATAGAGGAGAGAACCAGTGGGTGGATAAAATTTATGAATTGATGGATGCTGTTGATACCTATATTCCGATTCCACAGCGGCAGACTGATTTACCTTTCCTTATGGCAATTGAAGATGTTTTTACGATTACTGGTCGTGGCACGGTGGCGACAGGGCGTGTCGAGAGGGGCACAGTTAAGGTTGGGGACAGTGTGGATATAGTGGGTATTAAGGAAACGCGTGCTACAACAGTTACTGGGGTTGAAATGTTTCAGAAAACACTTGATGAAGCCATTGCAGGTGATAACGTGGGGCTTCTACTTAGGGGCATTCAGAAAACAGACATTCAAAGAGGAATGGTTATTGCCAAACCTGGCACCATTACACCACATACAAAGTTCACTGCTATTGTGTATGTGCTAAAGAAGGAGGAGGGAGGAAGACATTCGCCATTCTTTGCTGGATACAGGCCTCAATTCTACATGAGGACCACTGATGTTACTGGAAAGGTATCCAAAATAATGAATGATAAGGATGAAGAGTCGAAGATGGTTATGCCTGGAGACCGTGTAAAGGTGGATGTAGAGCTGATTTTTCCAGTGGCTTGTGAACAGGGAATGAGGTTTGCAATTAGAGAAGGTGGAAGGACTGTGGGGGCTGGAGTCATCCAGTCCATCATTCAATGA 1479 0.4814 MASFVGAPSSFSPSNFLLKNSPSSSSSYSTSTHLFFYSPHLKPKTLSFNLPASFVSGAPIFSSSDFYSSAPGDSHRRRPLVVRAAKGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLTLYEYPGDDVPVVSGSALLALEALMANPKINRGENQWVDKIYELMDAVDTYIPIPQRQTDLPFLMAIEDVFTITGRGTVATGRVERGTVKVGDSVDIVGIKETRATTVTGVEMFQKTLDEAIAGDNVGLLLRGIQKTDIQRGMVIAKPGTITPHTKFTAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSKIMNDKDEESKMVMPGDRVKVDVELIFPVACEQGMRFAIREGGRTVGAGVIQSIIQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2628 492 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 93 297 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 Pfam Elongation factor Tu C-terminal domain 391 490 IPR004160 -
Bisa07g2628 492 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 391 491 IPR009001 -
Bisa07g2628 492 CDD EFTU_II 304 390 IPR033720 -
Bisa07g2628 492 CDD EFTU_III 393 487 - -
Bisa07g2628 492 SUPERFAMILY Translation proteins 298 394 IPR009000 -
Bisa07g2628 492 FunFam Elongation factor Tu 84 296 - -
Bisa07g2628 492 NCBIfam small GTP-binding protein domain 96 228 IPR005225 GO:0005525
Bisa07g2628 492 PRINTS GTP-binding elongation factor signature 141 149 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 PRINTS GTP-binding elongation factor signature 97 110 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 PRINTS GTP-binding elongation factor signature 214 223 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 Gene3D Translation factors 431 491 - -
Bisa07g2628 492 Gene3D Translation factors 299 427 - -
Bisa07g2628 492 NCBIfam elongation factor Tu 85 492 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bisa07g2628 492 FunFam Elongation factor Tu 299 427 - -
Bisa07g2628 492 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Bisa07g2628 492 Gene3D - 85 296 IPR027417 -
Bisa07g2628 492 Hamap Elongation factor Tu [tuf]. 84 492 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bisa07g2628 492 CDD EF_Tu 94 296 IPR041709 -
Bisa07g2628 492 Pfam Elongation factor Tu domain 2 318 386 IPR004161 GO:0005525
Bisa07g2628 492 Pfam Elongation factor Tu GTP binding domain 93 294 IPR000795 GO:0003924|GO:0005525
Bisa07g2628 492 PANTHER ELONGATION FACTOR TU-RELATED 82 491 - -
Bisa07g2628 492 FunFam Elongation factor Tu 431 491 - -
Bisa07g2628 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 319 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2628 Bisa-ChrBisa07 58183150 58184628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2628 91 490 Eukaryotic Initiation Factors Gene Family AT5G60390 30.562 1.17e-46 166