Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2615 ATGGCGTCTTCGAGTTATTCGAACTCTCCCTGTGCGGCGTGCAAGTTTCTGCGAAGGAAGTGCATGCCAGATTGCATATTCGCGCCATACTTCCCACCGGAAGAGCCTCAGAAGTTCGCGAACGTTCACAAGATATTCGGAGCAAGCAACGTGAGCAAGCTGCTGAACGAAGTGCTACCCCATCAGAGAGAGGACGCAGTGAACTCTCTGGCTTACGAGGCGGAGGCTCGCATAAAGGACCCAGTCTATGGCTGTGTTGGGGCCATCTCCGTCCTGCAGAGGCAGGTCATCCGGCTCCAGAAGGAGCTTGATGCCACTAATGCAGATTTGATTCGCTATACCTGTAATGAAATCCCCAGTCATGATGCAACCAGGGATAGTATTAGTATGGGTGAGGGAGCTTCCACTCTTGCTCATCAATCTCCTTCTGCTTTTTATTATCCGACGTCGTCTCCTTGGAGTAATGATCCTCGTGGGGGTGGGGGTGGGGGTGCTTTTCATCACACAGGACCAGATCATAACATGTGA 528 0.5189 MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEIPSHDATRDSISMGEGASTLAHQSPSAFYYPTSSPWSNDPRGGGGGGAFHHTGPDHNM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2615 175 Coils Coil 89 109 - -
Bisa07g2615 175 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bisa07g2615 175 MobiDBLite consensus disorder prediction 148 175 - -
Bisa07g2615 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 125 - -
Bisa07g2615 175 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2615 Bisa-ChrBisa07 57953402 57953929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2615 1 160 AS2 family AT5G63090 63.043 7.46e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa07g2615 LOB 4.6e-42 No_clan