Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2606 ATGCTCTCTCTGCAATTTATAGCCACCAGAGCCCTCGATCGTCCTTCGCCATTGCTACTGGGCAGCAATTCTTCTTCATTTTGGGCGAGAGATCGGTGCTTACTCAAAGCAAGTTCTTCAAGTACCAGTAGAGAGAAGCTTCGATTCAATGGTGGAACTGTTAGGGTTTTCGCAATGTCTGGTAGTTCTTCCGCATTCAAGATCAATCTCAACGAGTATATGGTTACTCTGGAGAAACCACTTGGTATCCGGTTCGCTCTCACCGCTGACGACAAAATCATCGTTCATTCTCTTAAGAAAGGGGCTAACGCAGAGCGGTCGAGATTGATTATGGTCGGTGACACTTTGAAGAAAGCTGGCGATTCATCTCAAAATAGGCTTGTTGAGATAAAAAACTTCGAAGATGCAAAGAATGTACTAGAGAAGCAATCAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCCAGATCTCCTTTTCCCATTCAGCAACTGCATAAGATAAATGCTTTTGAAATACTATTTAATAGAGGTCGAGTTCCTATTGCCACCTGGAACAAGACACTATTGGCATCAAATTTACAGGCATCTAGTGAAAGTTTTGGGAATAGTGGGTTTTCTATCTTCAACTCAAAGTTTCTAACATCAAAAGGATGCAAGTTATTGGGCAATCCACATGAACATGTCATCCTCCATGAAGATATGAAATTTTTTACTGAAGAGGATTATGAAGGAGAGTGGGGTCATGGAAGTTTCCCACTTGAGGAATATATTAAAGCTCTGGATCGTTCGAAAGGCGAGATGTACTATGATCACTCCCTTGGTATGCACTATACTAAGATTACGGAACAAATATATGTGGGATCCTGTATACAAACAAAAGCTGATGTGGAGACCTTGTCAAAAGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCATCTGAAGCTGAGAATTGGGGAATCGATTTTAAATCCATTAATGAATCATGTCAAAGGAATAATATCCTTATGATCAACTATTCTATACGGGAGGGAGATTCGTATGATATGAGAAAGAAATTACCATTTTGTGTGGGGCTTTTCCTAAGGTTGCTGAGGAAAAATCATCGCGTTTTTGTTACTTGTACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTGCACTGGATGACAGACCTTTCCCTTCATGCAGCTTATACTTGGGTCACTGGGATGTACACATGCAGGCCTGACAGGCCAGCAATTGCATGGGCAACGTGGGATCTTATAGCTATGGTTGAAAAAGGTAAACATGATGGACCACCAACACATGCGGTCACATTTGTGTGGAATGAGATTGAGGGACAAGATGTAAATTTGGTGGGAGATTTTACTGGAAATTGGAAAGAACCAATCAAGGCTGTATACAAGGGTGGAATAAGATATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTACTACTATAAATTCATTGTTAATGGACAATGGAGGCATTCAACTGCTTCACCGGCAGAAAGGGATGAAAGGGGCAACGTTAACAATGTAATTGTGATTGGTGATACTGCCAGCGTTAGGCCTTCTGTCCACCACCAGCAGAAAGATGCCAACGTTGTCAAGGTGATCGAGAGGCCGTTGGATGAGAGAGAGCGGTTTAGGCTGGCAAAAGCAGCTCGCTGTATTGCTTTCTATGTCTGTCCTATCACATTAGCTCCCAAATCCCAAGTAATTGCATAG 1743 0.4211 MLSLQFIATRALDRPSPLLLGSNSSSFWARDRCLLKASSSSTSREKLRFNGGTVRVFAMSGSSSAFKINLNEYMVTLEKPLGIRFALTADDKIIVHSLKKGANAERSRLIMVGDTLKKAGDSSQNRLVEIKNFEDAKNVLEKQSSSFSLVLERPRSPFPIQQLHKINAFEILFNRGRVPIATWNKTLLASNLQASSESFGNSGFSIFNSKFLTSKGCKLLGNPHEHVILHEDMKFFTEEDYEGEWGHGSFPLEEYIKALDRSKGEMYYDHSLGMHYTKITEQIYVGSCIQTKADVETLSKVEGVTAVLNFQSASEAENWGIDFKSINESCQRNNILMINYSIREGDSYDMRKKLPFCVGLFLRLLRKNHRVFVTCTSGFDRSPACVIAYLHWMTDLSLHAAYTWVTGMYTCRPDRPAIAWATWDLIAMVEKGKHDGPPTHAVTFVWNEIEGQDVNLVGDFTGNWKEPIKAVYKGGIRYEVEVKLPQGKYYYKFIVNGQWRHSTASPAERDERGNVNNVIVIGDTASVRPSVHHQQKDANVVKVIERPLDERERFRLAKAARCIAFYVCPITLAPKSQVIA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2606 580 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 266 407 IPR029021 -
Bisa07g2606 580 CDD E_set_AMPKbeta_like_N 442 521 - -
Bisa07g2606 580 Gene3D Protein tyrosine phosphatase superfamily 268 534 IPR029021 -
Bisa07g2606 580 ProSiteProfiles PDZ domain profile. 67 155 IPR001478 GO:0005515
Bisa07g2606 580 CDD DSP_laforin-like 274 420 IPR045204 GO:0019203
Bisa07g2606 580 Pfam Glycogen recognition site of AMP-activated protein kinase 442 523 IPR032640 -
Bisa07g2606 580 SUPERFAMILY E set domains 439 522 IPR014756 -
Bisa07g2606 580 Gene3D Immunoglobulins 429 525 IPR013783 -
Bisa07g2606 580 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 23 573 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2606 139 576 Protein tyrosine phosphatase (PTP) family AT3G01510 66.222 0.0 618