Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2594 ATGGAACTCACCGATTCCGGCGACGAACTCAGGGACCACAGGCTGCCTCAGGATTCTCGCTCTGGGCTCGGAATCGACCTCAATGAGATCCCCTCGCCTTCTTTTGCTGAAACCCTACCGGACTCCGTCGACATCGTACGCGCTTACCACGAGAACCCGGCGCCTCCTCCCGGCGGCCCGGCCGGGATTCCAGGAGATGTGCGCGGCTCCACTTGTGGGGCCTGCGGTAAGCCCGAAGTGCGGGGTCATGTTATGGTCTGCGACGGATGCGAGCGTGGCTACCATTTGGGCTGCGCGGGAATGCGTGGCCGCCAGGCTGTGAACATCGATGAATGGGTTTGTGGAGAGTGCGTGTCCAGTGGGGTGAAGAGTAAGCGCTGGCCGTTGGGAGTCAAGTCCAAGCATCTTTTGGATATCAATGCTTCGCCTCCCAGCGATGCTGACGGCGAGGGCAGTGAAGAATTGCACGATTTGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTACCAACCCATTTGGTGCCCCAGTGACTTGTTCAAACTCTTACAACGGGAGTGCTTTTGGCTTCCCAAAAGCATCTGGGGCTGTGACACATGCTGGTAGAGTGGGTTTTGAGGATGTATTAAATCATACCCAACCAATGACTAGAAGTTTTGAGGAGGTAGATATGGATTTGCCTATTGGAAGGAATAGGAATAGTAAAAATACAGCTATTGGACTACCATCTCGAAGTCCAGGTGAGATATTTTTAAAGGCTCTCAGAGATTTTATTTCTGAAAGGCGCGGTGTTCTTGAGGATGGTTGGAGAGTAGAGTTTAGGCAACCAATGAACAGCTCTGAGTTGTATGCAGTTTACTGTGCTCCAGATGGAAAGATCTTTGATTCTGTGTATGAAGTGGCTTGTTATCTGGGGTTGATGCCTGGCTACCACTCTGTAGAATCTGAAATAAGAAATGAGAAGTCTACTGGGTCTCATACCAGAAAAAGAAAGTCAGCTAGACTTCCTCTAACCAATGGCTTTGCTGATAAAAAGGGAAGCTTTACCAGTAGTTTTAAGCATCCTTCTCCTGATGCCGTAAGTGTGGAGTGTGCTAATGCATGTGGGAACATATCAGAAGCCCCAATAATTGGAAGAAAAGACGATGATCACTCTGGTCCTCAGCAACCACCTGATGGACTTCCTTTACAGTTCGAAGATTTGTTTGTTCTTTCTTTGGGAAAAGTTGATGATAGGCCTTCATATTGTGATGTTAACCTTATCTGGCCAATAGGTTATAAATCTCTCTGGCATGATAAAATTACAGGATCCCTTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGGCCTATATTTAGGGTCAGAAGGTGTTCCTGTTCTGATTGTTCTATTCCAATTGGGTCAACCATGCTCTCAATGTCAAACCTCTGTCAATTTGTGAATCAAACCAATGAAGGTGAAAAGAAGATAAATGACGGTATAGAATGGAATGGTGATGAAAGTATCCAGATAATACTTTCTGATCCATGCCTTCCCTCAGAGAATGATGTCTTGAGTTGTCTTGAAACCAGCACTAATGAAGTATGTGATAATTATACATCAGACATATTGCAGACTGTAGCTGGTTCAGTTCAAGATAAAACTGAAAATTTGTTGTCTAATGACTTGGGGTTAATTGACGACATTGGTGAGATTTTGGTGGAGGAGCGTTCATCATCTGCTGCATGGAGAGATGTTTCCCAAAAATTAGTTAATGCTTGCAATGAAATCTGTAAGCAGAAAGGGACTCTAAAGTTCTATTGTAAACATGTTGAAAATGAAACATGCTTACATAGACAGGGCGTAAGTTATGGCAAGAGTGAAATACACTTGACTTCATTGGCTAAATTTGGCAGGTCACCTGCTGTCACCATCCCAGCTGTCATTCATGTGGGCAATGAGCTGGATAGTATATATGAGTTATTAAGGAAATGGTTGGAGCAGGATAGATTTGGATTAGATGTCGAATTTGTGCAAGAAGCACTAGAACTTCTTCCTGGTGTCCAAGGTTTATCAAAGTATGAATTCCTGAATAGTAGAAGTAATAGCTCTTCATTGCCAACAGTTGGAAATGGGTTCTTAGTGGCTGACTCGAGAAGTGGATCGCAATATCAGGAAGAAGAAGCAGTGCAAGGTTTATATAGGAGGCCCAAGAAAGTAAAATTGCGCAAAGAATGTATTGAAAATCATTGTCCACCTCCAGGGAAGCCGCTCTCCTCCAGGGTTCCTTGTGAACTCGCTGGTGATGTTTTTCAGGTTTGGGAGCTATTACGGAGATTTCATGAAATTCTGGGGTTGAAAGAACCTTTGTCATTGGATGAGCTGGAGAAGGAACTCATCAACCCATGGTTAGATGGGTCAGATTTTCTTGAAAAACTTGATAGGGATGGTGAACGAATCTTGTCCCCGAGCTGTGAAGCTGGTCCATCAGTGTCTGTGGAAAGTCCCCATGCATTTATTCAAGTGGAAACAGAAGCCATGAAAGAGGCAGCTCAAATTAAGCTTGCATCTTTCACTTACACCAGATGCTTTGGCATATCTTTGACCAAAGCTCATAATTCTTTGCTGGAAGTTCTGATAGGTGAACTGCAATCTAAGGTGGCTGCTCTGGTGGATCCAAATTTTGATCCTGGAGAGACAAGAACAAGACGTGGAAGAAGGAAAGATATAGATAGTACAATTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGGCTCGTAGATACATATTAGCTGTCTTATCAATGGATGGCAACCTAGACTCGCCAGAAATTACTGCACGGGAAAGTGGTAAGGTGTTTCGCTGCTTACAAGGTGATGGTGGTCTGCTGTGTGGCTCCCTTTCTGGTTTGGCTGGGATGGAAGCAGATGCACTGCTGCTTGCGGAGGCTACAAAGAAGATTTTCGGTTCTTTGAGCAGTGACAATGATGTACTTACCATGGAAGACGAGGAGTCTGATGCAAAGAGTGTTTCTGAGAAAACTTCACTGAATAATGGTAATGTTCCAGAATGGGCACAGGTTCTAGAACCTGTCAGAAAACTACCAACAAATGTGGGAACCAGAATCAGAAAGTGTGTCTATGATGCTTTGGATAAGGATCCACCAGAGTGGGCTAGGAAAATACTGGAGCACTCAATTAGCAAGGAAGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCTGTACTGGCTGATGTACAAGGTGAAGGGTTGCAACAGAAACCCAGTAAGGGAAGAAGAAAGAGGACTGTTATATCTATTTCTGACATCATCATGAAACAATGCCGTATTGTACTACGCCGTGCTGCTGCAGCAGATGATGCAAAAGTTTTTTGTAATTTGCTGGGACGGAAGTTGATAAATTCTTCTGATAATGATGACGAGGGGCTTCTTGGATCTCCAGCCATGGTGTCTCGTCCTCTTGACTTCAGGACTATTGACCTACGATTGGCTGCTGGGGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCACGAGCTGTGGAACAATGTTCGTATTGCTTTTGGAGATCAACCTGATTTAGTTGAATTGGCTGAAAATTTATCCCAGAATTTTGAATTATTGTATAATGAGGAGGTTGTTATTTATGTCCAAAGGCTCAGGGAGTATGCTAAATTGGGATGCTTAAGTGCAGAAATGAGAAAAGAAGTGGAAGATATGCTTGCATCAACAAGTGAAATTCCTAAAGCCCCTTGGGATGAGGGGGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTTGCAAGGATCCCTGAAGGAAACTGGTATTGTCCTTCTTGTGCTGATGGTAAACGGGCAGTTCAAGACGTTACAGAATGCACACAGCTTTTGGGCAAACATCGAAGTAAAAAATTTCAGGGAGAGGTTACTTCTCTTTACTTGGAGGCTTTAACGCATCTATTATCTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGAGCGAGAGAACTGTCCTTCTCAAGTTTTTATGTGATGAGTTGCTCAACTCTTCCCTTGTACGCCAGCACCTTGAGCAATGTGCTGAGTTATCTGCTGAATCACATCAGAAGTTGCGTGCACTTTCTGCAGAGTGGAAAAACCTAAAAATTAAAGAAGATATATTATCCACTAAAGCTGCAAAAATTGACACATGCTCGCTAGTAACTGCTGGAGAAGACCTCAAGGAGGGACCCACGGGGTCACTATCAAACCCCGGTAAATGCCTGGTTCAGCCCCATACTGCCGGTGACAGCCCTAACAATATTGCGGTATCTGCTGATAGTCTGTGTTCAGAAGAGATAAATAAAGAGAAAAATAGGTTCAATAGTGTTGAAAAAAGTGTATCTGTGACAAATTCAGAGACTGACATTCAAAATATGAATTCCTTGAATGTGGATGGCTGTCAATTGCCCACAAATCTTTTGTCCTGCATGGATTCTCAATGTAGTGACAAATCTAGTAAACCTTCAATATCAAATAATATACCTCAAGAAATTAACAGCTCTGGTGGAGCAGCTCATATCCAGGGTAACCAGCAGAAATGTGAGGGAGGGGATTCATCTACTGATCAGCAAGGACAATGTGTTCCTATTGATGTTCCCAAGTGTGTTGTGAATGAGTCAGAACCATACCACCCTGAGCTCAATGACATCAGACTTGAAATTTCGCATCTGCAGGACTCAATAACTAGTGTAGGATCACTGCTGCTGAAGCTTTCTGTTCGCCGGGAATATTTGGGTAGTGATTCACTTGGTCGATTGTATTGGGCTTCAGCTATGCCCGGAGGATGTCCATGTATAATTGTTGATTCAAGTGCTCTGGTGTTGCATGGAAGAAGAATCATTGATAACAGAGATCCTGTGGACAAGATTTCTGCTATGCAGAATTGTGTTCTATCTGGCAAGGACACCTATCAGTTGTTAGGGGTGATGAAGGACTTCTCTTCTCCGATTTCTTTACCGAATAATGCCCCAGGCTTTAGTTCGCCATGGGTTTCTTATCAAACTGATGTAGAAATTGAAGAGCTCTTAGAGTGGCTAAAGGATAGTGATCCTAAGGAAAAAGAACTGAGAGATTCCATTATGATGTGGCAAAAGTCAATATACCAAGAGTTTATTCATACACAGAATGAAGATCAGGCTGAGCACCAAGAAGCTTTTTCTGTGAAAGGAGGTAGAGAGCAAACAGTATCTAATTCTCTTGTTGCAAAGGCTACCTCCTTGTTAGAGAAGAAATATGGTCCATTCTTTGAGTCGGGTACCCTTGAGGTTTTGAAGAAGCGGAGTAAAAAGGCAAGAACACCTAATGATGAAAAGTTACATAGGTGTGAATGCCTAGAACCCATGTGGCCTTCTAGACAGCACTGCATGTCTTGTCACAAAACGCTTTCGAATGATGTTGAGCTGGAAGGCCACAATGATGGCAAATGTAATGCAGGTTTGCCTGCCTTGGAGAAGAATAAAGATCATAGCGGATCTTCTAAAGGAAGAGGGAGTGTGAAGTTTGAGACCACCTGTGAAAAAGTCAGAGGTGATGCAGACACCAGTGGAATTTCAACAAGTGGATGTTCTGAGCTTAGCTCAAGATTGATTAAGTTTTCAGATAATGAATCAAAATGCCCATACAACTTTGACGATATCTGTTCCAAGTTTGTGACGAAAGACTCCAACAAGGAACTTGTCAGAGAAATAGGTCTTATTGATTCAGATGGGATCCCATCCTTTGTACCTTCTGTATCTCCTCTTGTTAGTGATTTTACGGTTATGCTAATATCAACTAAAAAGGATGATGCTGTAACTGCTGCTGGTGGGTCCAAGGCTTTGGAAGGGCAGGTTCCTCTAGGAAATGCTGAAGGAACGGGCACATGCCGTGACCATATTTCTGGCATTTCTGTTAGAACTTCAGTTGTGTATGAAAACCGTAAAACAGGAAAATCCAGTAGATCAACTTTGAGATGTTCAGAACAAAGGAATGGAAAATCCTTATATTGTAATCCTGCTTCAGAAATGGGGGTTGATGGCTGCTGTGTGGTACCTTTGTCTTCATTGAGACCATTGGTTGGAAAAGTTTCCCATATTTTGAGGCAACTGAAGATCAGTCTACTTGATATGGATGCTGCACTCCCTGAAGTTGCTCTAAGACCATCAAAAGCACGATTAGAAAGACGACAGGCCTGGCGTGCATTCACTAAATCTGCAGGGACTATATATGAGATGGTTCAGGCGACAATTACATTGGAGGACATGATTAAGACAGAGTACTTACGAAATGACTGGTGGTACTGGTCATCACTCTCAGCTGCGGCCAAATCTTCTACTTTGTCATCCCTTGCCCTTCGTATATACTCCCTTGATTCAGCCATTATATATGAGAAAATATCCGGTTCTATTGATAGCTCTGAACCTTCTGTGGTAGCAGAACAGAAAGCACCAGCAACCTTGGATGCAGAGAAATCCAAAGCAAGCCGGAAGTCAAACAGGAAAAGGAAGGAACCAGATGGTTAA 6660 0.433 MELTDSGDELRDHRLPQDSRSGLGIDLNEIPSPSFAETLPDSVDIVRAYHENPAPPPGGPAGIPGDVRGSTCGACGKPEVRGHVMVCDGCERGYHLGCAGMRGRQAVNIDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELHDLRKHTLGDNSFGTNPFGAPVTCSNSYNGSAFGFPKASGAVTHAGRVGFEDVLNHTQPMTRSFEEVDMDLPIGRNRNSKNTAIGLPSRSPGEIFLKALRDFISERRGVLEDGWRVEFRQPMNSSELYAVYCAPDGKIFDSVYEVACYLGLMPGYHSVESEIRNEKSTGSHTRKRKSARLPLTNGFADKKGSFTSSFKHPSPDAVSVECANACGNISEAPIIGRKDDDHSGPQQPPDGLPLQFEDLFVLSLGKVDDRPSYCDVNLIWPIGYKSLWHDKITGSLFTCEVLDGGDSGPIFRVRRCSCSDCSIPIGSTMLSMSNLCQFVNQTNEGEKKINDGIEWNGDESIQIILSDPCLPSENDVLSCLETSTNEVCDNYTSDILQTVAGSVQDKTENLLSNDLGLIDDIGEILVEERSSSAAWRDVSQKLVNACNEICKQKGTLKFYCKHVENETCLHRQGVSYGKSEIHLTSLAKFGRSPAVTIPAVIHVGNELDSIYELLRKWLEQDRFGLDVEFVQEALELLPGVQGLSKYEFLNSRSNSSSLPTVGNGFLVADSRSGSQYQEEEAVQGLYRRPKKVKLRKECIENHCPPPGKPLSSRVPCELAGDVFQVWELLRRFHEILGLKEPLSLDELEKELINPWLDGSDFLEKLDRDGERILSPSCEAGPSVSVESPHAFIQVETEAMKEAAQIKLASFTYTRCFGISLTKAHNSLLEVLIGELQSKVAALVDPNFDPGETRTRRGRRKDIDSTIPARRAKLNMLPINELTWPELARRYILAVLSMDGNLDSPEITARESGKVFRCLQGDGGLLCGSLSGLAGMEADALLLAEATKKIFGSLSSDNDVLTMEDEESDAKSVSEKTSLNNGNVPEWAQVLEPVRKLPTNVGTRIRKCVYDALDKDPPEWARKILEHSISKEVYKGNASGPTKKAVLSVLADVQGEGLQQKPSKGRRKRTVISISDIIMKQCRIVLRRAAAADDAKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVRIAFGDQPDLVELAENLSQNFELLYNEEVVIYVQRLREYAKLGCLSAEMRKEVEDMLASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCADGKRAVQDVTECTQLLGKHRSKKFQGEVTSLYLEALTHLLSVMEEKEYWEYSVSERTVLLKFLCDELLNSSLVRQHLEQCAELSAESHQKLRALSAEWKNLKIKEDILSTKAAKIDTCSLVTAGEDLKEGPTGSLSNPGKCLVQPHTAGDSPNNIAVSADSLCSEEINKEKNRFNSVEKSVSVTNSETDIQNMNSLNVDGCQLPTNLLSCMDSQCSDKSSKPSISNNIPQEINSSGGAAHIQGNQQKCEGGDSSTDQQGQCVPIDVPKCVVNESEPYHPELNDIRLEISHLQDSITSVGSLLLKLSVRREYLGSDSLGRLYWASAMPGGCPCIIVDSSALVLHGRRIIDNRDPVDKISAMQNCVLSGKDTYQLLGVMKDFSSPISLPNNAPGFSSPWVSYQTDVEIEELLEWLKDSDPKEKELRDSIMMWQKSIYQEFIHTQNEDQAEHQEAFSVKGGREQTVSNSLVAKATSLLEKKYGPFFESGTLEVLKKRSKKARTPNDEKLHRCECLEPMWPSRQHCMSCHKTLSNDVELEGHNDGKCNAGLPALEKNKDHSGSSKGRGSVKFETTCEKVRGDADTSGISTSGCSELSSRLIKFSDNESKCPYNFDDICSKFVTKDSNKELVREIGLIDSDGIPSFVPSVSPLVSDFTVMLISTKKDDAVTAAGGSKALEGQVPLGNAEGTGTCRDHISGISVRTSVVYENRKTGKSSRSTLRCSEQRNGKSLYCNPASEMGVDGCCVVPLSSLRPLVGKVSHILRQLKISLLDMDAALPEVALRPSKARLERRQAWRAFTKSAGTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYSLDSAIIYEKISGSIDSSEPSVVAEQKAPATLDAEKSKASRKSNRKRKEPDG 2219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2594 2219 Gene3D - 394 502 - -
Bisa07g2594 2219 ProSiteProfiles Zinc finger PHD-type profile. 1271 1321 IPR019787 -
Bisa07g2594 2219 Gene3D - 1101 1223 IPR036427 GO:0005515
Bisa07g2594 2219 MobiDBLite consensus disorder prediction 2198 2219 - -
Bisa07g2594 2219 MobiDBLite consensus disorder prediction 1 19 - -
Bisa07g2594 2219 ProSiteProfiles FYR domain FYRN motif profile. 393 446 IPR003888 GO:0005634
Bisa07g2594 2219 ProSiteProfiles Zinc finger PHD-type profile. 69 120 IPR019787 -
Bisa07g2594 2219 ProSiteProfiles FYR domain FYRC motif profile. 550 692 IPR003889 GO:0005634
Bisa07g2594 2219 MobiDBLite consensus disorder prediction 1552 1576 - -
Bisa07g2594 2219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 137 IPR013083 -
Bisa07g2594 2219 ProSitePatterns Zinc finger PHD-type signature. 72 117 IPR019786 -
Bisa07g2594 2219 SUPERFAMILY DNA-binding domain 258 310 IPR016177 GO:0003677
Bisa07g2594 2219 ProSitePatterns Zinc finger PHD-type signature. 1274 1318 IPR019786 -
Bisa07g2594 2219 ProSiteProfiles DDT domain profile. 758 821 IPR018501 -
Bisa07g2594 2219 Pfam Methyl-CpG binding domain 256 308 IPR001739 GO:0003677
Bisa07g2594 2219 CDD PHD_SF 71 117 - -
Bisa07g2594 2219 SUPERFAMILY FYVE/PHD zinc finger 1259 1323 IPR011011 -
Bisa07g2594 2219 ProSiteProfiles Bromodomain profile. 1164 1212 IPR001487 GO:0005515
Bisa07g2594 2219 Pfam PHD-finger 72 119 IPR019787 -
Bisa07g2594 2219 Pfam PHD-finger 1273 1319 IPR019787 -
Bisa07g2594 2219 SUPERFAMILY Bromodomain 1108 1228 IPR036427 GO:0005515
Bisa07g2594 2219 SUPERFAMILY FYVE/PHD zinc finger 70 129 IPR011011 -
Bisa07g2594 2219 CDD PHD1_Lid2p_like 1273 1318 - -
Bisa07g2594 2219 MobiDBLite consensus disorder prediction 1 31 - -
Bisa07g2594 2219 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1353 1397 IPR028942 -
Bisa07g2594 2219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1224 1332 IPR013083 -
Bisa07g2594 2219 PANTHER OS02G0192300 PROTEIN 13 2215 - -
Bisa07g2594 2219 MobiDBLite consensus disorder prediction 2182 2219 - -
Bisa07g2594 2219 SMART PHD_3 1273 1319 IPR001965 -
Bisa07g2594 2219 SMART PHD_3 71 118 IPR001965 -
Bisa07g2594 2219 Pfam Bromodomain 1162 1216 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2594 Bisa-ChrBisa07 57568353 57580139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2594 1 2219 C2H2 Transcription Factor Family AT3G01460 47.373 0.0 1798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa07g2594 Bromodomain 5.6e-05 No_clan