Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2582 ATGGAACAAATCTCCATGTGGGTAGTATTCGTTCCGTTCCTTCTCCTCCTAAACACAAGTTGTTGTGTGGAGGACGAGGTTAGCAGTGCACTGATCAACTTTCTTGCAAAACTCTCCAACAACAATGGTCTCCAGAAATCTAGTTTGGTGTGGAACACAAGCTCTGATCCCTGCAAGGACCTGTGGCAAGGTGTTATATGCGATGCTAAAAACGTATCAGTAGAGAAGCTGTTCCTTGATAGGTCCAATTTAGCTGGAACTTTTGATGCTGCTATACTTTGCAGCTCGCAGCCCTTGGCTGCGTCTCTCACGATTCTTAGCCTCGACGGCAACAACGTGACTGGGGGAATAGCATCCGAGATTGGAAACTGCAAGCATCTCACTCACTTGCATGTAAGTGGGAACCAACTTTCTGGGAACCTTCCAAGCTCACTTGCCATGCTGAATAATTTGAAAAGACTTGACATTTCAAACAACAGGTTCTTTGGTAACTTGCCAAACTTGGCCAGAATCTCAGGGCTGAATGTGTTTCTAGCACAAAACAATCAGCTGAGTGGAGAGATACCCCCATTTGATTTCTCCAATTTTGACAACTTCAATGTGTCCTTTAACAACTTCAGTGGCCGGATTCCTGATGTGCAAGGCCATTTCCTTGCGGATAGCTTCTTAGGTAATCCTGAGCTCTGTGGAGATCCATTACCAAAAAACTGTTCAGCTCTCACTGTTGATAGCAAATCAGATTCAGAAGAATCGAAGGGTCCTTCCAAAAGCGAGATTCTAATGTACTCAGGGTATGCTGCATTGGGTTTGGTCGTTATCGTTTGTGTAGTCTTCAAGCTGTGTAAAAGAAACAAGACAGAGACGAAGGTTGAACCACTAAAAAAGGCACCTATAAATGATGGTACTGTTGACAAGCCTAGCTATGTTTCAAGTGAACACAAATTAGGCGAAAGCAGGTCTGAGTTTTCAGTCACTTCTGAAAGTGGGATGGTTTCCCAACCACTTATAGTTCTTTCAAGGCCAAATGTAAATGATTTTGAATTAGCGAATTTGCTGAGCGCCCCTGCAGAACTGATTGGCAGAGGAAAATATGGTTGTCTTTATAAGGTTATGCTTGACAATGGGATTAAGTTGGTTGTTAAAAGAATTCAGGACTTCAGTACCTCCAGCCATGACTTCAAACAGAGAATGCAAATGATGAGCCAAGTGAAGCACCCTAATGTACTCTCATCGCTTGCTTTCTATTGTTCCAAACAAGAGAAGCTTCTGGTCTATGAGTATCAGGAGAATGGAAGTTTATTCCAGCTTCTACATGGTTCCTCGAAAGACTTTGACTGGATCAGCAGACTGGGGATTGCAGCTACGCTTGCTAAGGCATTGGCTTTCATTCATCAAGAGCTTAGTGAACATGGTATTGCACATGGTAACTTGAAATCCTCCAACATTCTGCTGAACAAGAATATGGAGCCCTGCATAAGCGAGTATGGGATCATGGTTTCGGATGAACAACAAATTCAAATTCAACACAGCTCATCCTTTACCAGTTCTTCCGCTGCTGGTACATCAGATGCCTTCAAAGGAGATGTTTATGGCTTTGGTGTGATCCTTCTTGAACTACTTACTGGGAAGTTAGTGAAGAGCGATGGGGTGGACTTGACAGAATGGGTTCAGTCTGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGACAGGTCCCTAATATCAGAGTATGCAAGTGAAGAGAGAATGGTGAACTTGCTTCAAGTGGCTATAAAATGTGTTAACCATTCTCCAGAGGGTAGGCCAAGTATGGACCAGGTTGCTCTCATGATTAACACTATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGTATGGATTGTGTTGGATGAGGAGCTGTCAAAAGTATGTTGTATAGGTCTGCCTTGTGATCTGAGGATGTCAAAAGACATGTATCATAAGTGGATTTTTGACCATACCCATTTGAAAATGGCTTGGATTCAGCACCAAATCCAGCAAAAAGACGGTTACTTGAGTTACCCACCACCGGATTTACCTTCATATTCATCCCCATACCCGGGTTCTATTCACAACGAGTCAATGTCTTCGTCGTCATCTCCGTCATCCGCCGGTACTAGAATTAGTCCAGCTGTTCTTTTCATCATAGTAATTCTAGCCGTAGTATTTTTTGTATCTGGTCTGCTTCATCTGCTTGTTAGATTTCTCGGAAAGCACCCTTCGTCCTCACCATCTACTTATTCTAATAGACACCAAGAAAATTCCAGCAATGATGCTCTGCAGAGACAGCTCCAACAACTTTTCCATCTCCATGATTCGGGTCTAGATCAAGCTTTCATTGATGCGCTTCCTGTTTTCCAGTATAAAGAAATAGTGGGTCTGAAAGAACCATTTGACTGTGCTGTTTGTCTGTGTGAATTTTCTGAAAAAGATAAGCTCAGGTTGCTTCCTACGTGCAGCCATGCTTTTCATATCAGTTGCATAGACACCTGGCTTCTATCAAACTCGACATGCCCACTTTGTAGAGGAACCCTCTTTACTCCGGGATTTTCAATTGAAAACCCAATGTTTGATTTTGATGATCTAAGGGAAGAAGATGGGTGCCCCTGTAATGGAGAAAATGGAATTGCTGCTAGACAAAAAACAGTTGAAATTGAAGAAACCATCGAGAAAGGGGCTCTTCCTGTAAGACTTGGTAAGTTCAGAAAGCTCAATATGGAGGCAGGGGAGAATGCAGGAGGAGAGACTAGCAGCAGTAATTTGGATGCAAGAAGATGTTTCTCAATGGGATCTTATCAGTATGTGCTTGGCAACTCAGACCTACGAATTGCCCTGAACCATGACACAAAGCTTACAAAAGGAATCGAACACACTGATAAGCTTTCAATAGAGGGGGATAAGGAAGCAAAAAAGATTACAAGTGTTAAGAAGGGTGAGAGCTATTCCGTTTCAAAAATCTGGCAGTGGTCAAACAAGGGCAAATTTTCTAGTTCTTCCGGCGCTCAAATGGGCATGCCATCTTCTCTGGATACAGACTTGCCTTGGATGAGGACATTAGAAGGGACCTGA 3090 0.4282 MEQISMWVVFVPFLLLLNTSCCVEDEVSSALINFLAKLSNNNGLQKSSLVWNTSSDPCKDLWQGVICDAKNVSVEKLFLDRSNLAGTFDAAILCSSQPLAASLTILSLDGNNVTGGIASEIGNCKHLTHLHVSGNQLSGNLPSSLAMLNNLKRLDISNNRFFGNLPNLARISGLNVFLAQNNQLSGEIPPFDFSNFDNFNVSFNNFSGRIPDVQGHFLADSFLGNPELCGDPLPKNCSALTVDSKSDSEESKGPSKSEILMYSGYAALGLVVIVCVVFKLCKRNKTETKVEPLKKAPINDGTVDKPSYVSSEHKLGESRSEFSVTSESGMVSQPLIVLSRPNVNDFELANLLSAPAELIGRGKYGCLYKVMLDNGIKLVVKRIQDFSTSSHDFKQRMQMMSQVKHPNVLSSLAFYCSKQEKLLVYEYQENGSLFQLLHGSSKDFDWISRLGIAATLAKALAFIHQELSEHGIAHGNLKSSNILLNKNMEPCISEYGIMVSDEQQIQIQHSSSFTSSSAAGTSDAFKGDVYGFGVILLELLTGKLVKSDGVDLTEWVQSVVREEWTGEVFDRSLISEYASEERMVNLLQVAIKCVNHSPEGRPSMDQVALMINTIKEEEEKSLIYEVWIVLDEELSKVCCIGLPCDLRMSKDMYHKWIFDHTHLKMAWIQHQIQQKDGYLSYPPPDLPSYSSPYPGSIHNESMSSSSSPSSAGTRISPAVLFIIVILAVVFFVSGLLHLLVRFLGKHPSSSPSTYSNRHQENSSNDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPTCSHAFHISCIDTWLLSNSTCPLCRGTLFTPGFSIENPMFDFDDLREEDGCPCNGENGIAARQKTVEIEETIEKGALPVRLGKFRKLNMEAGENAGGETSSSNLDARRCFSMGSYQYVLGNSDLRIALNHDTKLTKGIEHTDKLSIEGDKEAKKITSVKKGESYSVSKIWQWSNKGKFSSSSGAQMGMPSSLDTDLPWMRTLEGT 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2582 1029 ProSiteProfiles Zinc finger RING-type profile. 807 849 IPR001841 -
Bisa07g2582 1029 Pfam Ring finger domain 806 849 IPR001841 -
Bisa07g2582 1029 Pfam Protein tyrosine and serine/threonine kinase 357 608 IPR001245 GO:0004672|GO:0006468
Bisa07g2582 1029 SUPERFAMILY Protein kinase-like (PK-like) 356 610 IPR011009 -
Bisa07g2582 1029 ProSiteProfiles Protein kinase domain profile. 353 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2582 1029 FunFam RING-H2 finger protein ATL46 769 854 - -
Bisa07g2582 1029 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Bisa07g2582 1029 Gene3D Transferase(Phosphotransferase) domain 1 429 628 - -
Bisa07g2582 1029 SMART ring_2 807 848 IPR001841 -
Bisa07g2582 1029 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 98 188 - -
Bisa07g2582 1029 Gene3D Phosphorylase Kinase; domain 1 325 427 - -
Bisa07g2582 1029 SUPERFAMILY L domain-like 47 215 - -
Bisa07g2582 1029 SUPERFAMILY RING/U-box 786 855 - -
Bisa07g2582 1029 CDD RING-H2_EL5-like 806 849 - -
Bisa07g2582 1029 Gene3D Ribonuclease Inhibitor 21 237 IPR032675 -
Bisa07g2582 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 782 854 IPR013083 -
Bisa07g2582 1029 PANTHER OS05G0588300 PROTEIN 9 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2582 Bisa-ChrBisa07 57317568 57324429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2582 6 615 Receptor kinase-like Gene Family AT3G08680 33.694 3.23e-87 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa07g2582 PK_Tyr_Ser-Thr 1.6e-24 CL0016