Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2561 ATGGCGGGAGAGACAAGCTTGGATGGGGAAGTTACGACATCAGACACGACAGGATCAGCAAGTCAACCACCAACTAAAGGTCCTGAAAATATCCCGGCTAAGACAGACAGGAAGCAAGATTCAAAGAAGAGCAAGGCCAAGGATCAAAGCAATAAAACAGTACCATTTCACAAGCTTTTCTCATATGCAGACTCTTCGGATCGTCTATTAATGTTTGTCGGCGCAATAGCTGCAGTTGCTAATGGAATGTCTATGCCTCTATTGACTATTATTATCGGAAATGTCATTGATGCTTTTGGAAGTAACAGTAACACCAAAGGGTTCGTTCATGATGTTTCCAAGGTGTGTCTACACTTTGTATACTTGGCTCTGGGTACCTTTGTCGCGTCATTTTTGCAGGTGACTTGTTGGATGGTCACTGGAGAGAGACAGGCTGCAAGAATTAGAAGCTTATACCTGCAAGCAATTCTGAGACAAGATATCGGCTTCTTTGATAAAGAAACTAGTAGTGGTGAGGTTATTGCAAGATTGGCAGGTGACACAGTTCTTATTCAAGAGGCAATGGGCGAGAAGGTAGGCAAGTTCATACAGCATGTGTCAACATTTGTAGGAGGTTTTATCATAGCATTTTCCAAGGGTTGGCTTCTAACCCTTGTCCTGCTATCTTTTCTGCCACCTCTCGTCCTCTCTGGTGCCTTAATGAGCTTCCTTGTAGCAAAGATGGCATCCCGTGGACAAGCAGCTTATTCTGCAGCAGCATCTGTAGTAGACCAGACTATCGGTTCTATTCGAACTGTTGCATCATTTACAGGGGAGAAGCAAGCCATAGCTCAATACAATAAATCCTTAATAAAAGCTTACCGTTCTGGTGTGCAAGAGGGAGTGGCTTCTGGTTTGGGTTTTGGTACAGTTCGTTTATTTGTGTACTGTAGTTATGCTTTGGCCATGTGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGGAGGACAAGTCTTAAGTGTATATTTTGCAATATCCACTTGCTCCTTGTCTCTCGGACAAGCATCTCCAAGCTTGACTGCATTTGCAGCGGGACAAGCTGCAGCCGTTAAAATGTTTGAAACAATTAAGAGAAAACCAGACATTGATGTGTACGACACTTCTGGTCGGCAGCTAGATGATATTCGTGGACGCATAGAATTGAAAGAGGTTTGCTTTAGTTATCCTGCAAGACCAGATGAACTGATATTCAATGGATTATCTCTTTCGATACCAAGTGGCACTACTGCAGCTTTGGTGGGCCAAAGTGGCAGCGGCAAATCGACAGTTATTAGTTTGATAGAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTCATTGACGGTGTTAATCTCAAAGACTATCAGTTGAAATGGATCAGACAAAAAATAGGCCTTGTCAGCCAAGAACCAGTTCTCTTTGCTTGTAGTATTAAAGAGAATATTGCTTATGGTAAGGATGGTGCAACGGATGAAGAAATCAGAGCTGCAACAGAGCTTGCTAATGCTGCTAAATTTATTGATAAACTTCCTCAGGGACTAGACACTATGGTAGGTGAGAATGGGACTCAGCTCTCTGGGGGTCAAAAGCAGAGAATCGCTATTGCAAGAGCAATTTTGAAAGACCCGAGAATTCTACTTCTCGATGAAGCTACAAGTGCCCTTGATGTTGAATCTGAGAGAATAGTGCAGGAAGCACTAGACAGAATTATGATAAGCAGGACTACCATCATTGTGGCCCACCGCTTAAGTACTATAAGAAACGCTGATATTATTGCCGTTATTCATCAAGGAAAGATAGTAGAAAAAGGTTCACATTCTGAGCTCATTAAGGATCCTGACGGAGCCTATAGCCAGCTCATCAGATTGCAAGAGACTAAAAGGGAGCTAAAACAAAATGGAGCAATTGACAATGATAGGCCAGAAAGCTTTGGGGGTTCTGGACAACAATTAAGTCAACGATTTTCTTTTCTTCGATCTTCAAGCCAAGGGTCATCTGGAAAAGGAAATAGCAGTCGTCACTCTTTCTCAATGTCTCACGGCGTGCCTACCTCAGTTGGTCTCTTGGAAACAACAGGTGGGGACTCTGAAGATCCTCCTTCTGCAACTTCACATAAACCTGCACAGGTCTCACTTCTACGCCTTGCTTATCTTAACAAGCCTGAATTCCCAGTGTTGCTCATGGGGACGCTGGCAGCAGCTGTAAATGGAGCAGTATTACCCGTTATGGGGCTCCTTCTATCTGGCATGATAAATACTTTCTATGAGCCTGCGGATAAACTTCGTAAAGATTCAAAATTCTGGGCATATGTATTTATTGCACTTGGTGTGGGAGCCTTCTTAACTTACCCGACAAGGTCCTACTTTTTTGGTGTAGCTGGTTGTAAGCTGATAAAAAGGATTCGGCTACTGTGTTTTGAGAAAGTGATTCATATGGAAATAGGTTGGTTTGACAAAGCAGAGCATTCAAGTGGAGCACTAGGAGCTAGGCTCGCTACAGATGCTGCTTCTATTCGAGCTTTGGTTGGGGATGCACTAGGTTTGTTGATTCAAGATATTGCCACTGCAATTACTGCTTTGGTAATCAGCTTTGAGGCAAACTGGCAACTTTCTTTGATCATTCTTGTTTTGCTACCTTTACTGGTATTAAATGGTGAGGCACAAGTAAAGTCCATGCAAGGATTCAGCACAGATGCAAAGAAACAATATGAGGAAGCAAGCCAAGTTGCAAATGATGCAGTAGGGAGTATAAGAACAATTGCTGCTTTCTGTGCTGAAGAGAAAGTAATAGAGTTATACCAGAAGAAATGTGAAGGACCAATAAAGACAGGTATAAGGCAAGGGTTAATCAGCGGAACTGGCTTAGGGTTATCATTCCTCTTTCTATATTCTGTCTATGCATGCAGTTTCTACGCTGGAGCACGACTTGTTCAAGTTGGCAAAACATCAATGTCAGATGTTTTTCGTGTCTTCTTTGTTCTCACTATGGCAGCTGTGGCACTCTCTCAATCTGGTTTTGTGGCCCCAGGTGCCAGTAACGCAAAAAGTTCTGCTGCTTCTATATTTGCTATTCTCGACCAGAAATCAAAAATAGACCCTAGTAATGACTCCGGAATGGTACTGCAAGATGTGAAGGGAGAAGTTGAGTTTCGCCATGTCTCTTTCAAGTATCCTTCCAGGCCTGATGTTCAAATATTCAGAGATCTTTGCCTCGCCATACATTTGGGCAAGACAGTTGCACTAGTGGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCACTGCTCCAAAGATTTTACGATCCAGACTCAGGTCACATTACACTCGACGGAATAGAAATCCAGAAGCTACAAATCAAATGGTTGAGGCAACAAATGGGTCTAGTAAGTCAAGAGCCTGTGTTGTTCAATGACACCATCCGAGCAAATATTGCATACGGAAAGGAAGGAGATGCAACAGAAGCAGAAATTATAGCTGCTGCAGAATTAGCAAATGCCCACAAGTTCATCAGTAGCTTGCATCAGGGTTATGAAACAGTCGTGGGGGAGCGAGGAGTTCAATTGTCCGGGGGTCAGAAGCAGCGAGTCGCGATTGCAAGAGCCATAGTGAAAAAACCTAGAATATTACTGCTAGACGAAGCCACCAGTGCCCTTGATGCTGAATCTGAGAAAGTGGTTCAAGATGCACTGGATCGTGTCACGATGGATAGAACCACAATTGTCGTGGCCCACAGGTTATCCACCATTAAGAATGCAGATTTAATCGCCGTCGTTAAAAATGGAGTCATTGCCGAGAAAGGGAAGCATGAAGCTTTGATCAACAAGGGTGGAGCCTACGCTTCCTTACTGGCACTGCACACAAGTGCTTCTCCATCTTAG 3903 0.4335 MAGETSLDGEVTTSDTTGSASQPPTKGPENIPAKTDRKQDSKKSKAKDQSNKTVPFHKLFSYADSSDRLLMFVGAIAAVANGMSMPLLTIIIGNVIDAFGSNSNTKGFVHDVSKVCLHFVYLALGTFVASFLQVTCWMVTGERQAARIRSLYLQAILRQDIGFFDKETSSGEVIARLAGDTVLIQEAMGEKVGKFIQHVSTFVGGFIIAFSKGWLLTLVLLSFLPPLVLSGALMSFLVAKMASRGQAAYSAAASVVDQTIGSIRTVASFTGEKQAIAQYNKSLIKAYRSGVQEGVASGLGFGTVRLFVYCSYALAMWYGGKMVLEKGYTGGQVLSVYFAISTCSLSLGQASPSLTAFAAGQAAAVKMFETIKRKPDIDVYDTSGRQLDDIRGRIELKEVCFSYPARPDELIFNGLSLSIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGVNLKDYQLKWIRQKIGLVSQEPVLFACSIKENIAYGKDGATDEEIRAATELANAAKFIDKLPQGLDTMVGENGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDVESERIVQEALDRIMISRTTIIVAHRLSTIRNADIIAVIHQGKIVEKGSHSELIKDPDGAYSQLIRLQETKRELKQNGAIDNDRPESFGGSGQQLSQRFSFLRSSSQGSSGKGNSSRHSFSMSHGVPTSVGLLETTGGDSEDPPSATSHKPAQVSLLRLAYLNKPEFPVLLMGTLAAAVNGAVLPVMGLLLSGMINTFYEPADKLRKDSKFWAYVFIALGVGAFLTYPTRSYFFGVAGCKLIKRIRLLCFEKVIHMEIGWFDKAEHSSGALGARLATDAASIRALVGDALGLLIQDIATAITALVISFEANWQLSLIILVLLPLLVLNGEAQVKSMQGFSTDAKKQYEEASQVANDAVGSIRTIAAFCAEEKVIELYQKKCEGPIKTGIRQGLISGTGLGLSFLFLYSVYACSFYAGARLVQVGKTSMSDVFRVFFVLTMAAVALSQSGFVAPGASNAKSSAASIFAILDQKSKIDPSNDSGMVLQDVKGEVEFRHVSFKYPSRPDVQIFRDLCLAIHLGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGIEIQKLQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGDATEAEIIAAAELANAHKFISSLHQGYETVVGERGVQLSGGQKQRVAIARAIVKKPRILLLDEATSALDAESEKVVQDALDRVTMDRTTIVVAHRLSTIKNADLIAVVKNGVIAEKGKHEALINKGGAYASLLALHTSASPS 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2561 1300 FunFam ABC transporter B family member 1 1046 1295 - -
Bisa07g2561 1300 Pfam ABC transporter 413 561 IPR003439 GO:0005524
Bisa07g2561 1300 Gene3D ABC transporter type 1, transmembrane domain 950 1296 IPR036640 GO:0005524|GO:0016020
Bisa07g2561 1300 FunFam Uncharacterized protein 1020 1046 - -
Bisa07g2561 1300 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1056 1293 IPR003439 GO:0005524
Bisa07g2561 1300 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2561 1300 ProSitePatterns ABC transporters family signature. 1196 1210 IPR017871 GO:0005524|GO:0016887
Bisa07g2561 1300 MobiDBLite consensus disorder prediction 7 28 - -
Bisa07g2561 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1045 1292 IPR027417 -
Bisa07g2561 1300 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524|GO:0016887
Bisa07g2561 1300 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 735 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2561 1300 Pfam ABC transporter transmembrane region 734 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2561 1300 Pfam ABC transporter transmembrane region 71 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2561 1300 FunFam ABC transporter B family member 1 384 633 - -
Bisa07g2561 1300 FunFam ABC transporter B family member 9 58 390 - -
Bisa07g2561 1300 CDD ABC_6TM_Pgp_ABCB1_D2_like 724 1039 - -
Bisa07g2561 1300 CDD ABC_MTABC3_MDL1_MDL2 1056 1290 - -
Bisa07g2561 1300 SMART AAA_5 421 607 IPR003593 GO:0016887
Bisa07g2561 1300 SMART AAA_5 1083 1276 IPR003593 GO:0016887
Bisa07g2561 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 632 IPR027417 -
Bisa07g2561 1300 Gene3D ABC transporter type 1, transmembrane domain 58 649 IPR036640 GO:0005524|GO:0016020
Bisa07g2561 1300 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Bisa07g2561 1300 Pfam ABC transporter 1076 1224 IPR003439 GO:0005524
Bisa07g2561 1300 FunFam ABC transporter B family member 1 714 1019 - -
Bisa07g2561 1300 SUPERFAMILY ABC transporter transmembrane region 722 1040 IPR036640 GO:0005524|GO:0016020
Bisa07g2561 1300 Gene3D ABC transporter type 1, transmembrane domain 698 891 IPR036640 GO:0005524|GO:0016020
Bisa07g2561 1300 MobiDBLite consensus disorder prediction 31 50 - -
Bisa07g2561 1300 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 355 - -
Bisa07g2561 1300 Gene3D - 1046 1295 IPR027417 -
Bisa07g2561 1300 Gene3D - 384 633 IPR027417 -
Bisa07g2561 1300 MobiDBLite consensus disorder prediction 1 50 - -
Bisa07g2561 1300 MobiDBLite consensus disorder prediction 666 686 - -
Bisa07g2561 1300 SUPERFAMILY ABC transporter transmembrane region 57 376 IPR036640 GO:0005524|GO:0016020
Bisa07g2561 1300 PANTHER ABC TRANSPORTER B FAMILY 34 636 IPR039421 -
Bisa07g2561 1300 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2561 Bisa-ChrBisa07 56978548 56983715 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2561 15 1294 Calmodulin-binding Proteins AT2G36910 43.861 0.0 1044