Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2552 ATGAGTTGGGGGTGGATTCCAAGTGTGGGTGTGGTTAAGAAGAAGAAAAGAAGCGGGTCAATTCGATCCATTTTCATGCATGCTGATGCCCAAGACTGGTTCTTGATGATTCTAGGTGTGTTGGGGTCCATTGGCGATGGCTTCATCAACCCTCTGGTTTTGTTTATCAGCAGCCACTTGATGAACAACATTGGAAAGGCATCTGGCATGGATGAAACTGCTTTCCTTCGTAACATCAATAAGAATGCAGTGGCTCTATTATATTTGGCCTGCGGGTCTTTTTTTGCATGCTTCCTGGAGGGTTATTGCTGGACGAGAACAGGAGAGAGACAAGCGGCGAGAATGAGAGCCAGGTATTTGAAAGCAGTGCTGAGACAAGAAGTGGCATACTTCGATTTGCATGTCACAAGCACGTCCGAGGTCATCACCAGCGTCTCCAACGACAGCATCGCAATTCAAGATGTTCTTAGCGAAAAGGTTCCAAATCTGCTGATGAATTTCTCCATGTTCGTCGGGAGCTACATAGCTGCTTTTGCAATGTTGTGGAAATTAGCCATCGTGGGGTTCCCTTTCGTGGTTCTTCTAGTGATCCCTGGTTTAATTTACGGTCGGACATTAATGGGGTTGGCTAGCAAGATCAGGGACGAGTACAACCAAGCTGGTACAATAGCAGAGCAAGCAATATCTTCCATCAGAACTGTGTATTCCTTCGTTGGGGAAAGCAAAACCATAGCTGCTTTCGCCTCAGCATTAGAAGGATCAGTTAAGTTGGGGCTAAAACAAGGCTTGGCTAAAGGCTTAGCCATAGGCAGCAACGGTGTTGTCTTCGCTATATGGTCCTTCATGTCCTATTATGGTAGCAGACTCGTCATGTACCATGGCGCCCAAGGTGGGACCGTTTTCGCCGTTGGAGCAGCCATAGGCGTCGGTGGATTAGCACTAGGTGCTGGTTTATCTAACGTGAAGTACTTCTCGGAAGCAAGTGCGGCAGGGGAACGCATAATGGAGGTGATAAAGAGAGTTCCAAAGATAGATTCTGAGAACATGGGAGGGGAGATTCTAGAGGAAGTGTGCGGTGAAGTAGAATTCGATCACATAGAATTTGCGTACCCATCGCGGCCAGATAGCATTATCCTGAACGACTTCTGTCTGAGGATTCCAGCAGGGGAGACAGTGGCCTTTGTGGGTGGGAGTGGCTCGGGGAAGTCCACAGTGATATCACTTATGCAGAGATTTTATGACCCACTTGGGGGAGAGATACGTCTTGATGGTGTGGCCATTCAGAAGTTGCAGCTCAAGTGGCTCAGATCGCAGATGGGTCTGGTGAGCCAAGAGCCGGCTCTGTTCGCAACAAGCATTAAGGAGAATATACTGTTCGGGAAAGAGGATGCTACGGAGGAAGAGGTCGTGGAGGCTGCCAAGGCTTCCAATGCCCATAATTTCATTTCGCAGTTGCCTCTGGGATACGACACCCTGGTGGGTGAGCGGGGAGTTCAAATGTCAGGTGGTCAAAAACAGAGGATCGCTATTGCGCGGGCAATAATCAAAAGACCACGAATTCTACTGCTTGACGAAGCAACGAGTGCATTAGACTCTGAATCCGAATGGGTTGTCCAAGAAGCTCTAGACAAAGCTGCCGTTGGCCGCACCACCATTATTATCGCTCACCGCCTCTCCACCATCCGAAATGCCGATGTCATCGCCGTTGTCCAAAACGGCAGCATCAAGGAAATGGGATCCCACGACGAGCTCATTGAAAACAACAATGGCCTTTACGCCTCTCTGGTTCGTCTCCAACAAACAGAGAAATCCAGAACTCAAGAGGAATTCCTCGTATCTGCCTCTTCCTCCATATCAAATAGAGACGTAGACAACACCAGCAATCGAAGGCTATCTCTTGTGACTTGTTCAAACTCTACAAATTCAATAACACCCAGTCGAGTTTCGCTCGCCGATGAAGAAACCAATGTCGTTATAGAAGATAAGAAACTCCCTGTTCCGTCGTTTCGAAGGTTGCTCGCCCTGAATCTCCCCGAATGGAAGCAAGCAACTTTGGGGTGTGTTAGTGCGGTTCTCTTTGGTGCAGTTCAGCCAGTGTACGCATTTGCATTGGGATCCATGGTATCTGTGTTTTTTCTGACTGACCATGACGAGATTAAGAGGAAGACGGAGATTTATGCGTTAATTTTTCTGGGGTTAGCAGCATCCTCGTTGCTTTTTAATATAAGCCAGCATTATAGTTTTGCCTACATGGGAGAGTATTTGACCAAAAGGGTAAGAGAGAGAATGCTTTCAAAGATACTCACATTTGAAGTTGGTTGGTTCGATCAGGACGAAAATTCTAGTGGTGCTGTTTGCTCTAGACTTGCCAAAGATGCCAATGTGCTGCGGTCATTAGTGGGAGATAGAATGGCTTTGCTGGTACAAACCTTCTCCGCGGTCATAGTAGCCTGCACGATGGGTTTGGTAATTGCATGGAGGCTTGCCATTCTTATGATAGCTGTCCAACCTCTTATCATAGCTTGCTTCTACACTAGGCGTGTGTTACTCAAAAGCATGTCTAACAGGGCCACTAAGGCCCAAAATGAATGTAGCAAGTTAGCTGCTGAAGCTGTTTCCAACCTTCGTACCGTTACAGCCTTCTCTTCTCAAGATCGAATACTCAAAATGCTTGAAAAAGCCCAAGAAGGCCCAAGCCGCGAGAGCAGTCGACACTCATGGTTCGCAGGCATTGGGCTTGCTTGCTCTCAAAGCCTCCAATCATGTACTTGGGCTTTAGACTTTTGGTATGGTGGCAAGCTTATCTCTAATGGCTACATCACAGCCAAAGCTCTATTCGAGACGTTCATGATATTAATAAGCACAGGCCGTGTCATTGCAGATGCAGGAAGCATGACCTCAGACCTCGCCAAAGGGTCAGATTCTGTGGGCTCTGTTTTTGCAGTTCTAGATCGATACACAAAAATCGAGCCTTATGACTCAGATGGGTACAAGCCTGAAAAGTTAACGGGATCAATAGAACTCCATGATGTTCATTTTTCGTACCCGGCTAGGCCTAATTTGTTGATCTTTCAAGGTTTCTCAATGAGTATTGAAGCTGGGAAGTCAACAGCATTGGTTGGCCAAAGTGGGTGTGGGAAATCAACCTTCATAGGGTTAATAGAGAGATTTTATGATCCACTAAAAGGGAGAATAAGCATAGATGGAAGAGACATAAAATCATATCACCTCCATTCATTAAGAGAACAGATAGCACTGGTAAGCCAAGAACCCACGTTATTCTCAGGGACCATAAAAGAAAATATTGCATACGGAGCATCCGATAAGGTTGATGAGGCAGAGATTATAGAGGCAGCCAGGGCAGCAAATGCTCATGAATTCATAGCAAGCTTGAGGGATGGGTATGATACATGGTGTGGGAACAGAGGAGTACAATTGTCAGGTGGTCAAAAGCAAAGAATAGCAATAGCGAGAGCCATAGTGAAGAACCCAAGGGTGTTATTACTGGACGAGGCAACTAGCGCGCTGGATAGCCAGTCAGAGAAGGTGGTACAGGATGCATTGGAACGTATGATGGTGGGAAGGACAAGTATAGTAGTGGCTCACAGGCTGAGCACCATACAAAAGTGTGATGCTATAGCTGTGTTAGAGAAGGGGATGGTGGTTGAGAAAGGCACACACTCATCCTTGTTGAAGAAGGGACCAACTGGGGCTTATTTCTCTCTTGTTAATCTTCAAGGGAGATCCTCCAAGTTCAATGTTGCTCGCTCCAATAACTAA 3780 0.4669 MSWGWIPSVGVVKKKKRSGSIRSIFMHADAQDWFLMILGVLGSIGDGFINPLVLFISSHLMNNIGKASGMDETAFLRNINKNAVALLYLACGSFFACFLEGYCWTRTGERQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSIAIQDVLSEKVPNLLMNFSMFVGSYIAAFAMLWKLAIVGFPFVVLLVIPGLIYGRTLMGLASKIRDEYNQAGTIAEQAISSIRTVYSFVGESKTIAAFASALEGSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSRLVMYHGAQGGTVFAVGAAIGVGGLALGAGLSNVKYFSEASAAGERIMEVIKRVPKIDSENMGGEILEEVCGEVEFDHIEFAYPSRPDSIILNDFCLRIPAGETVAFVGGSGSGKSTVISLMQRFYDPLGGEIRLDGVAIQKLQLKWLRSQMGLVSQEPALFATSIKENILFGKEDATEEEVVEAAKASNAHNFISQLPLGYDTLVGERGVQMSGGQKQRIAIARAIIKRPRILLLDEATSALDSESEWVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGSIKEMGSHDELIENNNGLYASLVRLQQTEKSRTQEEFLVSASSSISNRDVDNTSNRRLSLVTCSNSTNSITPSRVSLADEETNVVIEDKKLPVPSFRRLLALNLPEWKQATLGCVSAVLFGAVQPVYAFALGSMVSVFFLTDHDEIKRKTEIYALIFLGLAASSLLFNISQHYSFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAVCSRLAKDANVLRSLVGDRMALLVQTFSAVIVACTMGLVIAWRLAILMIAVQPLIIACFYTRRVLLKSMSNRATKAQNECSKLAAEAVSNLRTVTAFSSQDRILKMLEKAQEGPSRESSRHSWFAGIGLACSQSLQSCTWALDFWYGGKLISNGYITAKALFETFMILISTGRVIADAGSMTSDLAKGSDSVGSVFAVLDRYTKIEPYDSDGYKPEKLTGSIELHDVHFSYPARPNLLIFQGFSMSIEAGKSTALVGQSGCGKSTFIGLIERFYDPLKGRISIDGRDIKSYHLHSLREQIALVSQEPTLFSGTIKENIAYGASDKVDEAEIIEAARAANAHEFIASLRDGYDTWCGNRGVQLSGGQKQRIAIARAIVKNPRVLLLDEATSALDSQSEKVVQDALERMMVGRTSIVVAHRLSTIQKCDAIAVLEKGMVVEKGTHSSLLKKGPTGAYFSLVNLQGRSSKFNVARSNN 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2552 1259 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Bisa07g2552 1259 ProSitePatterns ABC transporters family signature. 1146 1160 IPR017871 GO:0005524|GO:0016887
Bisa07g2552 1259 Gene3D - 996 1255 IPR027417 -
Bisa07g2552 1259 FunFam ABC transporter B family member 1 23 357 - -
Bisa07g2552 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2552 1259 Pfam ABC transporter 1025 1174 IPR003439 GO:0005524
Bisa07g2552 1259 Gene3D ABC transporter type 1, transmembrane domain 24 975 IPR036640 GO:0005524|GO:0016020
Bisa07g2552 1259 SUPERFAMILY ABC transporter transmembrane region 663 990 IPR036640 GO:0005524|GO:0016020
Bisa07g2552 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Bisa07g2552 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 995 1246 IPR027417 -
Bisa07g2552 1259 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Bisa07g2552 1259 FunFam ABC transporter B family member 4 996 1251 - -
Bisa07g2552 1259 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Bisa07g2552 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 685 971 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2552 1259 Gene3D - 351 600 IPR027417 -
Bisa07g2552 1259 Pfam ABC transporter transmembrane region 685 954 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2552 1259 Pfam ABC transporter transmembrane region 36 302 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2552 1259 FunFam ABC transporter B family member 4 351 607 - -
Bisa07g2552 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 599 IPR027417 -
Bisa07g2552 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 334 - -
Bisa07g2552 1259 PANTHER ABC TRANSPORTER B FAMILY 13 740 IPR039421 -
Bisa07g2552 1259 SMART AAA_5 388 679 IPR003593 GO:0016887
Bisa07g2552 1259 SMART AAA_5 1033 1226 IPR003593 GO:0016887
Bisa07g2552 1259 CDD ABC_MTABC3_MDL1_MDL2 1006 1246 - -
Bisa07g2552 1259 SUPERFAMILY ABC transporter transmembrane region 27 342 IPR036640 GO:0005524|GO:0016020
Bisa07g2552 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1243 IPR003439 GO:0005524
Bisa07g2552 1259 Coils Coil 850 870 - -
Bisa07g2552 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 989 - -
Bisa07g2552 1259 FunFam Putative ABC transporter B family member 8 649 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2552 Bisa-ChrBisa07 56814469 56821363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2552 7 1246 Calmodulin-binding Proteins AT2G36910 44.877 0.0 1053