Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2533 ATGACAATTAAAGGAGGCACAAACAAGGCCTGCGCTGCTTGCAAGTACCAGCGAAGAAGATGCTCCAAGGACTGCCCTCTCTCTCCCTATTTCCCAGCCGATCAGACTAACAGGTTCAGTAACGCTCACCGATTGTTCGGGGTCGCCAACATTAAGCGAATACTAAAGCAGGTTGAGCCTCAGCAGAGAGACGAGGCCATGAAATCCATCATTTTTGAGTCTGATATGCGAGCCCAGTATCCTGTCACGGGGTGTCTGGGTGTTATATGGAACTATAATAATCAGATACTTAACGCCATGCAGGAACTTCGTTATCTCAAGATGAGAATCGCCATCTACAAAGAGAGCTCTCATTCTCAACAAATATTGCCTCCTGATACGCTAGATTCACAGATGGGAGTTCCTGCGGCCAGTAATGATACCTTCTCGATTTACAACCACTTGCAGAATCATAATGATAGTGAAGTTGGTGTTTTTGATGGGAACGGAGTTTATGGTAATACTTATATTGAAAGTGCTCAACAGGTACCTTTTAATGCCATGGCCGCACAGTCAACGTCTCCTTTCATAGCGAATCTGAATCAGCAAGGAATGGATATTGCGGCTGACTATGACATGCCGTTTGATCACGCGATGGTGGATGACAGGCAATCATTTACTGAATGCAGAGAACCATGCAAATCAAGTGTGGAGTTATCGTTCAGAGAAGCAAAACATCACTTTGAACATGTCTGTGATAATGAACTAAAGAGTGCAGCTGCACGATTCAGTTTAACGAGTGTGAAGGGATGA 792 0.4457 MTIKGGTNKACAACKYQRRRCSKDCPLSPYFPADQTNRFSNAHRLFGVANIKRILKQVEPQQRDEAMKSIIFESDMRAQYPVTGCLGVIWNYNNQILNAMQELRYLKMRIAIYKESSHSQQILPPDTLDSQMGVPAASNDTFSIYNHLQNHNDSEVGVFDGNGVYGNTYIESAQQVPFNAMAAQSTSPFIANLNQQGMDIAADYDMPFDHAMVDDRQSFTECREPCKSSVELSFREAKHHFEHVCDNELKSAAARFSLTSVKG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2533 263 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bisa07g2533 263 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Bisa07g2533 263 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2533 Bisa-ChrBisa07 56507999 56508917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2533 1 114 AS2 family AT3G47870 54.386 2.29e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa07g2533 LOB 3.1e-36 No_clan