Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2507 ATGACTAATCAATGTCATATCTTTTTAAAAATACATGAACTAATTGTTCGTATTTGTGAAAACGCAGGGGGTGCAGCCTTCTTGGTGAAGCGATCGATGTCGTTTTCGGGGATGGAGAACAAGTACGACATGGAGGTGAATGGAGATGATGAGCTGTCGGATGATGGGTCGCTGCAGATGGGGGAGAAGAAGAAGAGGCTGAACGTGGAGCAGGTGAAGGCCCTCGAGAAGAGCTTCGAGGTTGGGAACAAGCTTGAGCCAGAGAGGAAAATGGAGCTGGCTAAGGCTTTGGGTCTGCAGCCTCGACAGATCGCCATTTGGTTCCAAAACAGGAGAGCCCGATGGAAAACCAAGAACCTCGAGAAAGAATATGAACTCCTCAAGAAACAGTTCGAAGCTCTCAAGTCTGACAACGATGCCCTTAAGCTTCAGAACCAGAAACTTCATGCTGAGTTACAAGCTCTGAAAGGTAGAGATAGCTGTGAAGGCAGAACAGTAAGCCTGATGAAGAAAGAAACTGAGGGTTCTTGGAGCAATAATGGAAGCGATAACAGCTCAGACATAAATTTGGATCTGTCAAGAACTGTATGTTCTCAGAATGGCAAAACCCAGCTTGTAGCCTCCACCCTGAAGCCCACCAGCATAACCCAACTCCTCCAGTTCTCATCAAGATCAGACCTCCAAGATGTCACCTTCTCCAACATGTTCAACGGCAGTAATAATGTGGATGATCAGCAGCAGAACTTCTGGACCTGGCCTGAGCAGCAGCATTTCCATTGA 780 0.4705 MTNQCHIFLKIHELIVRICENAGGAAFLVKRSMSFSGMENKYDMEVNGDDELSDDGSLQMGEKKKRLNVEQVKALEKSFEVGNKLEPERKMELAKALGLQPRQIAIWFQNRRARWKTKNLEKEYELLKKQFEALKSDNDALKLQNQKLHAELQALKGRDSCEGRTVSLMKKETEGSWSNNGSDNSSDINLDLSRTVCSQNGKTQLVASTLKPTSITQLLQFSSRSDLQDVTFSNMFNGSNNVDDQQQNFWTWPEQQHFH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2507 259 Gene3D - 56 126 - -
Bisa07g2507 259 FunFam Homeobox-leucine zipper protein ATHB-13 54 122 - -
Bisa07g2507 259 SUPERFAMILY Homeodomain-like 56 120 IPR009057 -
Bisa07g2507 259 Coils Coil 110 158 - -
Bisa07g2507 259 Pfam Homeodomain 63 116 IPR001356 GO:0003677
Bisa07g2507 259 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Bisa07g2507 259 SMART HOX_1 61 122 IPR001356 GO:0003677
Bisa07g2507 259 CDD homeodomain 63 119 IPR001356 GO:0003677
Bisa07g2507 259 PRINTS Lambda-repressor HTH signature 89 98 IPR000047 GO:0003677
Bisa07g2507 259 PRINTS Lambda-repressor HTH signature 98 114 IPR000047 GO:0003677
Bisa07g2507 259 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Bisa07g2507 259 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 32 250 IPR045224 GO:0003700
Bisa07g2507 259 Pfam Homeobox associated leucine zipper 118 157 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2507 Bisa-ChrBisa07 56113289 56114826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2507 22 254 Homeobox Transcription Factor Family AT5G15150 47.710 3.74e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa07g2507 Homeodomain 6.6e-16 CL0123