Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2502 ATGCCTATCCGATTAAGTTACAATGCAGACCACAAGGGAGATAATATCTCCAGCAGTGGCACCAATTACTCTGTGTTCGTGGGGGTGGGAATGGCGGAAGCTACAGAACCTAAAGCAGTGCCCGAGGCTGAGAAGAAGAAGGAGCAGAGTTTACCTTTCTACCAGCTCTTCTCTTTCGCAGACAAGTATGATTGGGTTCTCATGATCTCTGGGAGCATAGGAGCCATCGTTCATGGGTCATCCATGCCTGCTTTCTTCCTTCTTTTCGGTCAGATGATGAATGGGTTTGGCAAGAATCAGATGGATTTGAAGAAACTGACAGAAGAAGTATCTAAGTATTCTCTGTATTTTGTGTACCTTGGCCTCGTCGTTTGCGTATCGTCTTATGCAGAAATCGCGTGCTGGATGTATACTGGGGAGAGACAAGTGAGCACGCTGAGAAAGAAGTACTTGGAGGCGGTGCTTAAACAGGACGTTGGTTTCTACGACACAGACGCAAGAACTGGGGATATCGTTTTCAGCATCTCCACTGATACTCTGCTCGTTCAAGATGCTATCAGCGAGAAGGTGGGGAACTTCATACATTATGTGTCAACCTTTCTGGCTGGACTGGTGGTTGGGTTTGTGTCAGCATGGAGGTTAGCTCTTCTAAGTATTGCTGTGATTCCGGGCATAGCTTTTGCGGGTGGCTTGTATGCTTACACCCTCACAGGTCTCACCTCCAAGAGTCGCGAATCCTACGCAAATGCTGGCATAATCGCCGAGCAGGCAATTGCACAAGTTCGAACTGTTTACTCATATGTTGGTGAGAGTAAGGCCCTAAATAGTTATTCTGATGCGATACAAAACACACTGAAGCTTGGATACAGGGCTGGAATGGCTAAGGGTTTGGGATTGGGATGCACATATGGGATAGCTTGCATGTCCTGGGCATTGGTTTTTTGGTATGCTGGGGTGTTCATCAGAAATGGACAGACCGATGGAGGAAAGGCATTCACGGCTATTTTCTCTGCCATCGTTGGTGGCATGAGTTTAGGTCAGTCATTTTCGAATTTAGGTGCGTTCAGTAAAGGCAAAGCAGCTGGATACAAATTGATGGAAATTATCAAGCAGAAACCCACAATAGTGGAAAACCCATTAGATGGGAAGTGCTTGCCTGAGATTAATGGCAACATTGAACTTAAGGATGTCACTTTCAACTATCCATCAAGGCCAGATGTACTCGTCTTTCGCAATTTCTCAATCTTTTTCCCTGCTGGCAAAACTGTTGCAGTTGTCGGTGGTAGTGGGTCGGGAAAAAGCACTGTGGTGTCCTTGATAGAAAGATTCTACGATCCTAACGAAGGGTTGGTTTTATTGGACAACGTGGACATCAAGACTCTACAATTGAAATGGTTACGTGATCAAATTGGGTTGGTGAATCAAGAACCCGCGCTCTTTGCAACCACCATATTTGAGAATATAGTTTATGGAAAACCTGATGCAACCTTGGCTGAAGTAGAAGCTGCTGCTTCTGCTGCAAATGCTCATAGCTTTATTTCCTTGCTTCCTAATGGTTATAACACACAGGTAGGAGAGCGAGGAGTGCAGTTATCGGGGGGTCAAAAACAGAGGATTGCAATTGCCAGAGCTATGTTGAAGAATCCAAAGATCCTTCTTTTAGATGAAGCAACCAGTGCTCTTGACGCAAGCTCTGAAAGCATTGTTCAAGAAGCACTAGACCGCCTCATGGTTGGACGTACAACTGTAGTTGTTGCCCATCGTCTATCTACCATAAGGAATGTAGACAGCATAGCAGTTATACAGCAAGGGCAAGTGGTAGAGACAGGAACCCATGAAGAGCTTATGGCCAAGGCAGGCACCTATGCTTCACTAATTCGGTTCCAAGAAATGGTCGGAAACAGAGATTTTTCCAACCCATCAACTCGCCGGACACGCTCTTCGCGGCTGAGCCATTCTCTGTCAACCAAGTCTTTGAGCCTACGGTCTGGAAGCTTGAGGAATTTGAGCTACCAGTACAGCACAGGAGAGGATGGTCGCATTGAGATGATATCAAATGCAGAAACTGACAAGAAGAATCTTGCTCCTGATGGGTATTTCTTCCGTCTGCTCAAGTTGAATGCCCCTGAATGGCCTTACTCAATAATGGGAGCTGTAGGGTCTGTTCTTTCTGGGTTCATTGGCCCAACTTTTGCCATTGTTATGAGCAATCTGATCGAGGTCTTTTATTATAGAAATTCTGATTCCATGGAGAAGAAGATTAAGGAGTATGTTTTCATATACATTGGAGTAGGTCTTTATGCCGTTGGTGCATATTTGATCCAACATTACTTCTATAGTATTATGGGAGAAAACCTTACTACAAGAGTTCGAAGAATGATGCTTGCTGCAATTTTAAGGAATGAAGTGGGATGGTTCGATGAGGACGAGCATAACTCGAGCCTTGTTGCAGCTCGTCTTGCCACTGATGCTGCTGATGTAAAGTCTGCCATTGCTGATAGACTCTCAGTAATACTGCAGAACATGACATCTCTTCTCACTTCTTTTATAGTTGCTTTCATAGTGGAATGGAGAGTTTCCTTGCTCATATTGGGAGCCTTCCCTCTTCTTGTTCTAGCTAACTTTGCTCAGCAACTGTCTTTGAAGGGTTTTGCTGGAGACACAGCGAAGGCTCATGCAAAGACAAGTATGATTGCAGGAGAGGGAGTGAGTAACATCAGAACAGTTGCTGCATTCAATGCCCAAAACAAGATAATCTCTCTATTCTGCCACGAGCTTCGTGTCCCACAGCGTCAAAGCCTTCGACGGAGCCAAACTTCCGGCGTCCTATTTGGCCTCTCTCAGCTTGCCCTTTATGCCTCCGAAGCTCTCATTCTGTGGTACGGCGCACATCTTGTAAGCAAAGGCGATTCTACCTTCTCAAAGGTCATCAAGGTTTTCGTGGTCCTAGTCGTCACTGCTAATTCCGTCGCAGAAACTGTAAGCCTTGCTCCGGAGATAATCAGAGGCGGCGAAGCCGTTGGCTCTGTCTTCTCCATCCTCGACCGTGTAACTAGGATTGACCCTGATGATCCCGATGCCGAGCCAGTTGAATCCATTCGTGGGGAAATTGAACTTAGACATGTTGATTTCGCCTACCCATCACGACCTGACATCATGGTGTTTAAAGATCTTAATCTTAGAATACGTGCAGGCCAGAGCCAAGCTCTTGTGGGAGCTAGTGGGTCAGGGAAGAGTTCTGTGATTGCATTGATCGAGCGTTTCTATGACCCAGTTGCTGGTAAAGTCATGATAGATGGGAAGGACGTTAAAAGATTGAAATTGAAGTCTTTGAGGCTTAAGATTGGGTTAGTGCAACAAGAGCCTGCTTTGTTTGCAGCTAGCATTTTCGATAACATAGCCTATGGTAAAGAAGGGGCAACTGAAGCAGAGGTGATAGAAGCTGCTCGAGCAGCTAATGTGCATGGATTTGTTAGCAGTCTGCCTGAGGGTTACAAGACCCCAGTTGGTGAGAGAGGGGTTCAACTATCTGGTGGCCAAAAACAGAGGATAGCTATAGCCAGGGCCGTGCTTAAGGATCCTGCGATTCTTCTGCTAGACGAGGCCACAAGTGCACTTGATGCTGAGTCAGAGTGTGTGCTACAAGAAGCCTTGGAGAGGCTAATGAGGGGTCGAACCACGGTGCTTGTGGCACATCGTTTATCAACCATAAGAGGGGTTGACAGTATAGGAGTGGTGCAAGATGGGCGCATTATTGAGCAAGGAAGCCATTCTGAGCTTGTGAGTCGACCAGAGGGTGCATATTCTAGACTCTTGCAGCTACAACATCATCATGTATGA 3840 0.4609 MPIRLSYNADHKGDNISSSGTNYSVFVGVGMAEATEPKAVPEAEKKKEQSLPFYQLFSFADKYDWVLMISGSIGAIVHGSSMPAFFLLFGQMMNGFGKNQMDLKKLTEEVSKYSLYFVYLGLVVCVSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFYDTDARTGDIVFSISTDTLLVQDAISEKVGNFIHYVSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYRAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVENPLDGKCLPEINGNIELKDVTFNYPSRPDVLVFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGLVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIFENIVYGKPDATLAEVEAAASAANAHSFISLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDASSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELMAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGEDGRIEMISNAETDKKNLAPDGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNLIEVFYYRNSDSMEKKIKEYVFIYIGVGLYAVGAYLIQHYFYSIMGENLTTRVRRMMLAAILRNEVGWFDEDEHNSSLVAARLATDAADVKSAIADRLSVILQNMTSLLTSFIVAFIVEWRVSLLILGAFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIISLFCHELRVPQRQSLRRSQTSGVLFGLSQLALYASEALILWYGAHLVSKGDSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGEAVGSVFSILDRVTRIDPDDPDAEPVESIRGEIELRHVDFAYPSRPDIMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPVAGKVMIDGKDVKRLKLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVIEAARAANVHGFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIIEQGSHSELVSRPEGAYSRLLQLQHHHV 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2502 1279 CDD ABC_6TM_Pgp_ABCB1_D2_like 704 1020 - -
Bisa07g2502 1279 CDD ABC_MTABC3_MDL1_MDL2 1037 1275 - -
Bisa07g2502 1279 Gene3D - 1027 1279 IPR027417 -
Bisa07g2502 1279 ProSitePatterns ABC transporters family signature. 1176 1190 IPR017871 GO:0005524|GO:0016887
Bisa07g2502 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1273 IPR003439 GO:0005524
Bisa07g2502 1279 Gene3D - 390 653 IPR027417 -
Bisa07g2502 1279 FunFam ABC transporter B family member 1 55 387 - -
Bisa07g2502 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 71 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2502 1279 ProSitePatterns ABC transporters family signature. 531 545 IPR017871 GO:0005524|GO:0016887
Bisa07g2502 1279 Gene3D ABC transporter type 1, transmembrane domain 115 1011 IPR036640 GO:0005524|GO:0016020
Bisa07g2502 1279 PANTHER ABC TRANSPORTER B FAMILY 34 727 IPR039421 -
Bisa07g2502 1279 Pfam ABC transporter 1056 1204 IPR003439 GO:0005524
Bisa07g2502 1279 CDD ABC_MTABC3_MDL1_MDL2 392 629 - -
Bisa07g2502 1279 FunFam ABC transporter B family member 1 695 1003 - -
Bisa07g2502 1279 SUPERFAMILY ABC transporter transmembrane region 702 1016 IPR036640 GO:0005524|GO:0016020
Bisa07g2502 1279 Pfam ABC transporter 411 559 IPR003439 GO:0005524
Bisa07g2502 1279 SUPERFAMILY ABC transporter transmembrane region 56 379 IPR036640 GO:0005524|GO:0016020
Bisa07g2502 1279 CDD ABC_6TM_Pgp_ABCB1_D1_like 68 365 - -
Bisa07g2502 1279 FunFam ABC transporter B family member 19 382 630 - -
Bisa07g2502 1279 SMART AAA_5 419 710 IPR003593 GO:0016887
Bisa07g2502 1279 SMART AAA_5 1064 1250 IPR003593 GO:0016887
Bisa07g2502 1279 MobiDBLite consensus disorder prediction 636 656 - -
Bisa07g2502 1279 FunFam ABC transporter B family member 19 1027 1276 - -
Bisa07g2502 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1275 IPR027417 -
Bisa07g2502 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 392 628 IPR003439 GO:0005524
Bisa07g2502 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 715 1002 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2502 1279 Pfam ABC transporter transmembrane region 73 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2502 1279 Pfam ABC transporter transmembrane region 715 986 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa07g2502 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 629 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2502 Bisa-ChrBisa07 56053914 56062478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2502 30 1275 Calmodulin-binding Proteins AT2G36910 53.555 0.0 1352