Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2500 ATGGAGGAGAAGAATGAAATGGATAATGTTGACGATGTGATGTTGCCTGGTTTTCGGTTTCATCCCACGGACGAGGAGCTTGTTGATTTTTACCTCAAAAGAAAAATTCAGCAGAAATCTCTTCCCATTGAGATAATAAAACAAGTGGATATCTACAAATACGACCCATGGGATCTCCCCAGCAGAGCCTCCAAAGGCATCAAAACTGAGTGGATGATGCATGAGTTTCGCCTCCCATCTCTCTCTGATTCAACTGCTCCCAGGAAGCTCTCGGACAAAACCCTCCCTGCAACTGCCTCATGGGCGATTTGTAGGATATTCAAGAAATCCAACCCCATGTCCATGGCACAGAAAGCTTTGTCTCACCCCTGGATCCATCATTTACAAGAAAGTATGGTAGCTGATATACTCACTCATGGTGGTGCCAACTGCTACAATCAGTCAAGTCCAGAAAATCTGTCTTCCACATCAGAAAATATCTTCAGTACCAATTTCTCGGCTTCAGATATACCCTCTTACAAACCAATCAATGTCCCTGTCTCCATGTCCCCCCAAATTCCTGTTCCAAACGGAGATTTTGGTGAGAGATATATGTTCTCCACACTGGAAACGTCAAGCTCCATGCTTTTGAACCCAGACTGCATAGGATTTGAAGGGGCTAACCAGCAGTTTAGCGGTTTCTCAATGAGTGTACCACAGACAGATATGCAGGGAAGCATAAGCACAGAAACAGGACGAACTTTTGGGTTTCCCTTCAGTTTGCCTGATCCGGAAGTTTCTCTACTATGGGACTCACCCCATTGTCCTACTGACATGTCCATTAATAAATGA 831 0.4452 MEEKNEMDNVDDVMLPGFRFHPTDEELVDFYLKRKIQQKSLPIEIIKQVDIYKYDPWDLPSRASKGIKTEWMMHEFRLPSLSDSTAPRKLSDKTLPATASWAICRIFKKSNPMSMAQKALSHPWIHHLQESMVADILTHGGANCYNQSSPENLSSTSENIFSTNFSASDIPSYKPINVPVSMSPQIPVPNGDFGERYMFSTLETSSSMLLNPDCIGFEGANQQFSGFSMSVPQTDMQGSISTETGRTFGFPFSLPDPEVSLLWDSPHCPTDMSINK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2500 276 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Bisa07g2500 276 Pfam No apical meristem (NAM) protein 16 63 IPR003441 GO:0003677|GO:0006355
Bisa07g2500 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 63 - -
Bisa07g2500 276 Gene3D NAC domain 23 63 IPR036093 GO:0003677|GO:0006355
Bisa07g2500 276 Gene3D NAC domain 64 113 IPR036093 GO:0003677|GO:0006355
Bisa07g2500 276 SUPERFAMILY NAC domain 13 109 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2500 Bisa-ChrBisa07 55989135 55990348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2500 2 91 NAC Transcription Factor Family AT5G39820 58.889 4.50e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa07g2500 NAM 5.3e-14 No_clan