Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa07g2497 | ATGGGAAGGCCGCCTTGCTGTGATAAAGAAGGCGTCAAGAAAGGACCTTGGACACCTGAAGAAGATATCATATTGGTGTCCTATATCCAACAACATGGTCCTGGAAACTGGAAGGCTGTTCCCACTAATACAGGGTTGTCACGTTGCAGCAAGAGTTGCAGACTTAGATGGACTAATTACCTGAGGCCAGGAATTAAACGCGGTAACTTCACGGAACAAGAGGAGAAGATGATTATCCATCTTCAAGCTCTTTTGGGCAATAGATGGGCTGCTATAGCTTCGTATCTTCCACAGAGAACAGACAACGACATAAAAAACTATTGGAATACCCATCTGAAAAAGAAGCTCAGGAAATTGGAGACGGGTGGCGAAGAAGAGAGCATGAAAGATGGGTTTTCAGCCTCACGCCCAATGCCTCGAGGTCAGTGGGAAAGAAGGCTCCAAACCGACATCCACACGGCCAAGAGAGCTCTCACAGAGGCACTCTCACCCCACAAGCCTTTTGCTTCTTCTCAATCAAATCCCTCTAACAATCTCGCCTTTTCTTCCATTAAACCAACCCAATCCTCAAGCTATGCGTCAAGTGCCGATAACATAGCTCGTTTGCTCAAAGAATGGAAGAAAAATCCACCAATGAAAAAGCCCTCCCAAGTTGACTCGGACATGACCCACAATTCCTTCAAAAACTTGGTTGCTGGCGGGAGTTATGTCAATACTGGCTGTAGCAAAGAAGCCCCAAGTAATGAAACCAAAGGAAGCAGCTTTGAAACGTTTGATTCATTGTTTGGTTTGGAGTCTTTGGATTCTTCAAATTCTGAATTTTCTCAATCTCTCTCTCCTGACCCCGAGGCTTCTATTTTTCTTCAACACGAAAGCAAGCCAGAGACTGGTGCAGAATTGCCCCTTTACTTGCTAGAAAAATGGCTTCTTGATGAGGTTGCTTGCCAAGACAGTTAA | 957 | 0.4514 | MGRPPCCDKEGVKKGPWTPEEDIILVSYIQQHGPGNWKAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLETGGEEESMKDGFSASRPMPRGQWERRLQTDIHTAKRALTEALSPHKPFASSQSNPSNNLAFSSIKPTQSSSYASSADNIARLLKEWKKNPPMKKPSQVDSDMTHNSFKNLVAGGSYVNTGCSKEAPSNETKGSSFETFDSLFGLESLDSSNSEFSQSLSPDPEASIFLQHESKPETGAELPLYLLEKWLLDEVACQDS | 318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa07g2497 | 318 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
| Bisa07g2497 | 318 | CDD | SANT | 69 | 112 | IPR001005 | - | |
| Bisa07g2497 | 318 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Bisa07g2497 | 318 | Gene3D | - | 68 | 131 | - | - | |
| Bisa07g2497 | 318 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Bisa07g2497 | 318 | MobiDBLite | consensus disorder prediction | 119 | 139 | - | - | |
| Bisa07g2497 | 318 | Gene3D | - | 13 | 66 | - | - | |
| Bisa07g2497 | 318 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Bisa07g2497 | 318 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Bisa07g2497 | 318 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Bisa07g2497 | 318 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 240 | - | - | |
| Bisa07g2497 | 318 | MobiDBLite | consensus disorder prediction | 165 | 194 | - | - | |
| Bisa07g2497 | 318 | FunFam | MYB-related transcription factor | 13 | 66 | - | - | |
| Bisa07g2497 | 318 | FunFam | Transcription factor MYB30 | 68 | 126 | - | - | |
| Bisa07g2497 | 318 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
| Bisa07g2497 | 318 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Bisa07g2497 | 318 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 116 | IPR017930 | - | |
| Bisa07g2497 | 318 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 65 | IPR017930 | - | |
| Bisa07g2497 | 318 | MobiDBLite | consensus disorder prediction | 163 | 194 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa07g2497 | Bisa-ChrBisa07 | 55938159 | 55939340 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa07g2497 | 1 | 312 | MYB Transcription Factor Family | AT5G62470 | 50.000 | 3.31e-101 | 299 |
Transcription factors information