Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2494 ATGCACCCCACAAAACTGCCCTTTACAATCAAGTTTGGGGCCACTGTACGTCCTGGGATTAAATCCTGCTTAGCTGGAAGGGCCAAGATGAGGAAGCGTCAAGTGGTACTGAGGAGAGAGGAGCCTGCAAGGAGCTCAAGTTTCACAGCGAGGAGTGCGAGATATGGAGAGTGCCAGAAAAATCATGCGGCTAACGTTGGAGGCTACGCCGTCGATGGCTGCCGGGAGTTCATGGCTAGCGGCAACGAAGGCACCACCGCGGCTCTCACCTGTGCCGCCTGTGGCTGCCACCGTAACTTCCACAAAAGGGAGCTAGAGACTGAGGTAGTGTGCGAGTGCTCCTCACCTCCCTCCAACGGCAGTTCTTGA 369 0.561 MHPTKLPFTIKFGATVRPGIKSCLAGRAKMRKRQVVLRREEPARSSSFTARSARYGECQKNHAANVGGYAVDGCREFMASGNEGTTAALTCAACGCHRNFHKRELETEVVCECSSPPSNGSS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2494 122 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 104 IPR006456 -
Bisa07g2494 122 Pfam ZF-HD protein dimerisation region 53 105 IPR006456 -
Bisa07g2494 122 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 34 108 - -
Bisa07g2494 122 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 54 104 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2494 Bisa-ChrBisa07 55863432 55864499 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2494 30 121 Zinc finger-homeobox gene family AT3G28917 72.000 1.28e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa07g2494 ZF-HD_dimer 1.7e-29 No_clan