Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2492 ATGGACATAACCCCCACAATCACCAACGCCACCGCCACAAATACATCAATTAGTACAAAATCCCCAGAACATGACAGTGAAACGCCGACCCGGATTCAAACCGCCGCCAAGCCAGTGTTCTTTTCCAACGGTGTCCTCAAGCGCCACCACCCGCACCCCGTCTCCGTCCAGCCCGTGCCGGTCACCTACAAAGAATGCTTGAGAAACCATGCGGCCAGCTTAGGAGGTCATGCTCTGGACGGTTGCGGCGAGTTCATGCCCTCTCCCAATGCCACCTCCACCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAATTTCCACCGTCGTGAGCCCGAGGAGCCCGTTTCCGCAACCCACGTTATTGAGTACCAGCCCCTCCATCGACACCACCCGCCGCCCCCTCCGCCCTTCCAAGCCTCGAATCGGAGCCCCAACTCGGCGTCCCCACCGCCGATCTCGTCGTCTTACTACCCCTCCGCACCCCACATGCTTCTGGCTCTGTCCGGGGCTGGGATATCAGCTCCTCCAGAGAACGCGGCTGCTCCGACGAACTCCCTGGCGACGCCTAGCCCGAATGCCCGGAAGCGGTTCAGGACCAAGTTCACTCAGGATCAGAAGGAAAAGATGCACCAGTTCGCGGAGAGGGTGGGATGGAAGATGCAGAAGAGGGACGAGGAATTGGTGCGAGAGTTCTGCAATGAGGTTGGGGTTGACAGGGGAGTATTGAAGGTTTGGATGCACAACAACAAGAACACTCTCGGAAAGAGAGATGCCATTCACGATGGCCGGAACGCTTTAGAGCAAGACCCTAACGCCCTCTCCACCGAAGTCCTCGGTAACAATAACAACAACGATAACAACGGCACCGCACAGGATTCCAATCATCACTACACGCACGATAGTGGGATAAACGTCGGTACTAATGGATCGTCCTCGTCCTCCTGA 957 0.5758 MDITPTITNATATNTSISTKSPEHDSETPTRIQTAAKPVFFSNGVLKRHHPHPVSVQPVPVTYKECLRNHAASLGGHALDGCGEFMPSPNATSTDPSSIKCAACGCHRNFHRREPEEPVSATHVIEYQPLHRHHPPPPPPFQASNRSPNSASPPPISSSYYPSAPHMLLALSGAGISAPPENAAAPTNSLATPSPNARKRFRTKFTQDQKEKMHQFAERVGWKMQKRDEELVREFCNEVGVDRGVLKVWMHNNKNTLGKRDAIHDGRNALEQDPNALSTEVLGNNNNNDNNGTAQDSNHHYTHDSGINVGTNGSSSSS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2492 318 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Bisa07g2492 318 MobiDBLite consensus disorder prediction 182 198 - -
Bisa07g2492 318 SUPERFAMILY Homeodomain-like 190 259 IPR009057 -
Bisa07g2492 318 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 257 - -
Bisa07g2492 318 MobiDBLite consensus disorder prediction 1 31 - -
Bisa07g2492 318 NCBIfam homeobox domain, ZF-HD class 198 255 IPR006455 -
Bisa07g2492 318 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 62 114 IPR006456 -
Bisa07g2492 318 FunFam Zinc-finger homeodomain protein 2 186 259 - -
Bisa07g2492 318 MobiDBLite consensus disorder prediction 278 318 - -
Bisa07g2492 318 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Bisa07g2492 318 MobiDBLite consensus disorder prediction 129 159 - -
Bisa07g2492 318 MobiDBLite consensus disorder prediction 179 198 - -
Bisa07g2492 318 Gene3D - 186 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2492 Bisa-ChrBisa07 55844354 55845310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2492 1 298 ZF-HD Transcription Factor Family AT3G28920 50.161 3.30e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa07g2492 ZF-HD_dimer 5.6e-29 No_clan