Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2487 ATGCCGAGGACAACCCAAGATATGTGCAGATTCAGTACTGAAACAAACCAGCAACAAAACTCAACAACCTACAACCATTCTCCACGGCTTTCTTTTTCAAAACTTGCACAGAATTACCCTCCTGGTTTCCTCAGAAAGGTATTGGCAGAGATCATAGGGACCTATCTGCTGGTGTTTGTGGGAAGTGGTTCGGCTGCTCTTAATGCTAATGATGAACGTAAAATCTCAAATCTTGGAGCTTCACTTGCAGGAGGATTCATTGTGATTGTGATGATTTACGCGATCGGACACATATCTGGCGCCCACATGAACCCTGCTGTCTCCTTAGCTTTTGCCGCTTTGAGGCACTTTCCATGGAAACAGGTCCCATTTTACGTGGCAGCTCAACTGACAGGAGCCATTTCTGCTTCGTTTACGCTGAAAGTGCTGTTGCACCCAATAAGACAGCTTGGAACAACCTCTCCTTCGGGAACAGACATTCAAGCTCTAATCATGGAGATCGTAGCAACGTTCACTATGATGTTCGTCGCCTCCGCCGTGGCCACTGATGCAAAAGCTATAGGAGAGTTGGCAGGAGTTGCAGTAGGCTCTTCAGTATGCATAGCAGGCATCCTTGCAGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTGGGTCCTGCAATTGCAAGTGCATCCTACAAGGGAATTTGGGTCTATCTGGTTGGACCAGTTATTGGGGCACTTTTAGGGGCATGGTCTTACGGTACTATTCAGGAGACAAGAAAGTCACCTTCCCCGACTTCACTACCTTCATTTCGATTCAAGCTAGACTTGATGACTAGTGAAACTGATCAAGTTGGAAACAAAGACAATCCACAAGTTCTGTGTGAGAACAGTGTTTAA 891 0.4635 MPRTTQDMCRFSTETNQQQNSTTYNHSPRLSFSKLAQNYPPGFLRKVLAEIIGTYLLVFVGSGSAALNANDERKISNLGASLAGGFIVIVMIYAIGHISGAHMNPAVSLAFAALRHFPWKQVPFYVAAQLTGAISASFTLKVLLHPIRQLGTTSPSGTDIQALIMEIVATFTMMFVASAVATDAKAIGELAGVAVGSSVCIAGILAGPISGGSMNPARTLGPAIASASYKGIWVYLVGPVIGALLGAWSYGTIQETRKSPSPTSLPSFRFKLDLMTSETDQVGNKDNPQVLCENSV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2487 296 Gene3D Glycerol uptake facilitator protein. 4 262 IPR023271 -
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 196 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 233 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Bisa07g2487 296 SUPERFAMILY Aquaporin-like 39 257 IPR023271 -
Bisa07g2487 296 NCBIfam MIP family channel protein 49 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 CDD MIP 45 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa07g2487 296 PANTHER AQUAPORIN NIP2-1 18 258 IPR034294 -
Bisa07g2487 296 MobiDBLite consensus disorder prediction 1 25 - -
Bisa07g2487 296 Pfam Major intrinsic protein 43 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2487 Bisa-ChrBisa07 55721143 55723685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2487 45 269 Major Intrinsic Protein MIP AT1G80760 46.222 1.35e-71 221