Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2461 ATGAAGAGATCCTTAGAAGTGATAACAGGCAAGTGGCGCAGAGAAGAAGATGATCTTCTCAAGGCCTGTATTCAAAAGTTTGGGGAAGGAAACTGGCACCTTGTTCCTCAAAGAGCAGGCCTAAAGAGATGCAGGAAGAGCTGTAGACTCAGGTGGTTGAACTATCTAAAACCCGATATCAACAGGGGAGAGTTCACTGAGGATGAAGTTGATATGATGGTCAGACTGCACAGACTCTTGGGAAACAGGTGGGCACTGATAGCTGGGAGGCTTCCTGGAAGAACATCTAATGATGTGAAAAACTACTGGAACACAAATAGGCGTAAGAAGCGACGTCCATCTGGCGAGAAAGAGCTGAATGAAAAAGCAGAGGAATTAACAAGCGTGAAACCCCACTTACATAGAGTAATAAGACCTCGAGCTTTCAGCTTCTCAAGGAATTCGTGTTGGCTGAGAAAGAAATTACCAGATCATCATCATCATAATGCTAATACAAGCAGTAGTGATGCAAATGAACAGCCACAACAGTTGGAGTTGGAGGATTCGATGATGGAGTGGTGGAAAAGTTTGCTTGATGACAGTGATGACGTTGAAAAGGGTATAAGCGAACAACAAAACGCCCTGCTATCTCTATCCTCCTCCTCCTTCTCCTCCTCCTCGTCATCTAATTATATGTCTAAGCAAGAACGGAATCATGAGCTCCTCTGGGATTGGGATGAGCAACTTGCTTCGATTAATGAATTCCCTCTGGACACTAACCTCTGCGATTTTCTCTCTTAA 780 0.4423 MKRSLEVITGKWRREEDDLLKACIQKFGEGNWHLVPQRAGLKRCRKSCRLRWLNYLKPDINRGEFTEDEVDMMVRLHRLLGNRWALIAGRLPGRTSNDVKNYWNTNRRKKRRPSGEKELNEKAEELTSVKPHLHRVIRPRAFSFSRNSCWLRKKLPDHHHHNANTSSSDANEQPQQLELEDSMMEWWKSLLDDSDDVEKGISEQQNALLSLSSSSFSSSSSSNYMSKQERNHELLWDWDEQLASINEFPLDTNLCDFLS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2461 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Bisa07g2461 259 SMART sant 61 109 IPR001005 -
Bisa07g2461 259 SMART sant 8 58 IPR001005 -
Bisa07g2461 259 FunFam Myb transcription factor 9 61 - -
Bisa07g2461 259 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Bisa07g2461 259 CDD SANT 11 56 IPR001005 -
Bisa07g2461 259 MobiDBLite consensus disorder prediction 99 126 - -
Bisa07g2461 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Bisa07g2461 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 216 - -
Bisa07g2461 259 Gene3D - 9 61 - -
Bisa07g2461 259 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Bisa07g2461 259 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Bisa07g2461 259 ProSiteProfiles Myb-like domain profile. 10 56 IPR001005 -
Bisa07g2461 259 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Bisa07g2461 259 CDD SANT 64 106 IPR001005 -
Bisa07g2461 259 MobiDBLite consensus disorder prediction 109 126 - -
Bisa07g2461 259 Gene3D - 64 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2461 Bisa-ChrBisa07 55076187 55077610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2461 10 202 MYB Transcription Factor Family AT1G66370 47.685 1.15e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g2461 Myb_DNA-binding 1.1e-13 CL0123