Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2454 ATGGCAGCTTGTATAATCTCGGTTTCACAGCACGGAAACGCAGACTATCGGACGGTGCAAGAAGCAATCGATGCTATCCCGCTCGGCAACAAATGTCGGACAGTGATTCGAGTATCGCCGGGAATCTACAAACAGCCGGTGTACGTGCCCAAGACTAAGAACTTCATTACCCTTGCTGGTCTATGCCCGGAGAAAACTGTGCTTACCTGGAACAATACCGCCACAAGAATCGAACACCACCAGGCTGCTCGGATTATCGGAACTGGTACTTTTGGTTGTGGGAGCACCATTGTGGAAGGGGAGGATTTTATTGCTGAGAACATCACGTTCGAGAATTCCGCTCCTCAGGGCTCCGGGCAGGCAGTGGCAATTAGAGTAACTGCAGATCGATGTGCTTTCTATAATTGCAGATTCCTTGGATGGCAGGACACTCTATACTTACATTATGGCAAACAGTACTTGAGAGATTGTTATATTGAAGGGAGTGTGGACTTCATTTTTGGCAATAGCACCGCCCTTTTGGAACATTGCCATATCCACTGCAAGTCTCAAGGCTTCATAACTGCACAGGGCAGAAAATCTTCTCATGAAACAACTGGTTATGTTTTCTTAAGATGTGTCATCACGGGTAATGGAGGTAGTTCATATGCATGTCTTGGACGACCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATACACTTACATGGATCAATGTATAAAGCATGTTGGCTGGAACAATTGGGATAAAGCTGAGAATGAGAGAACTGCTTGCTTTTACGAGTACAGGTGTTTTGGACATGGTTGCTGTCCATCCAAACGAGTAACGTGGGCTAGAGAGTTGATAGATGAAGAAGCAGAGCAGTTCCTTGGGCATCATTTCATTGACCCTGATGTTAATAGACCTTGGCTTGCCCAAAGGATGGCCTTGAGGATTCCATATTCTGCTTAG 951 0.4616 MAACIISVSQHGNADYRTVQEAIDAIPLGNKCRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEKTVLTWNNTATRIEHHQAARIIGTGTFGCGSTIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQGRKSSHETTGYVFLRCVITGNGGSSYACLGRPWGPFGRVVFAYTYMDQCIKHVGWNNWDKAENERTACFYEYRCFGHGCCPSKRVTWARELIDEEAEQFLGHHFIDPDVNRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2454 316 Gene3D - 3 310 IPR012334 -
Bisa07g2454 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Bisa07g2454 316 FunFam Pectinesterase 2 309 - -
Bisa07g2454 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Bisa07g2454 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
Bisa07g2454 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2454 Bisa-ChrBisa07 55040088 55043335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2454 5 309 Carbohydrate Esterase AT5G47500 39.048 8.20e-71 222