Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2451 ATGGCAAGGAAGAGAAAGGCTGTGGAATTAGAGGAAGAGGGAAGCATGAAATGGGAAGAGATAGCTGAAGTAGTGGCAGGAAGCAGAAGAGCCAGAAAGCGTTTTGTTGGGGTGAGACAGAGGCCTTCAGGAAGATGGGTGGCTGAGATTAAGGACACCATTCAGAAGATAAGGGTCTGGTTGGGAACTTTCGACACAGCAGAGGAAGCTGCAAGAGCCTATGACGAGGCTGCTTGTCTGCTTCGTGGTGCCAATACTAGGACCAATTTCTGGCCTTGTTCTTATTCTTCTTCAACCCCAGCTCTTCCCTCTAAGATCACCAACCTCCTCCTCCAGAGGCTTAAAGCCAGGAACAACTCTTGCTCTGCTCCTTTATCTTCTTCTTCTGACTTTTCTTCCTCTGGTTCTCTTCTCGTCAGCCACCAGCAGAAGCAGCAAGGAGAAGTGTATAATGAAGAAGGATATGCAGATTTTTCTGTTGACCAGTTCACTGATTTCCTCAATGATCCTTCTGAAGATTACAGTCTAACCAGCAATGACTTTTCTATCAATGGTGCACAAGTTGATTGCTTTACTAGTAGTTTTGAATCATGTTTGACGGAAAAAGATGAGTGCAAGGGAAGAGAAACGGATTTGGAAAATAACATCGCACAGACAGAGGAAGAGAGCGAAGAAGTCATCCATCTGGGTGTCCAAGATTTTGAGTTTCTGGACATTGCTCCATCTTGTTACTACTATTCTGCTTTTGAGATAACTGAAGAGATGGAGGAGCCTGTGGTGGAGCCAGCGGGATATGGGGATGAACCTTCAATGCTCAGAGCAGCCATGAAAAGGATGAAGTATGAGAGGAAGTTCTCAGCTTCGCTTTACGCATTCAATGGGATACACGAGTGCTTGAAGCTGAAATTAGGATCCGGAAACTTCAAGGGAAGAGGGATTTCCGATCATTTAACCAACCTTCAGATGGCCTGTAGTCACAAGGAGAAAATCGAGGAGAATAAGGAGGAAAAAGAACATATGGGAGCAATGGATATGAAAGCGGAAGAAAACTCCGAAACATCGGTAAAGGAGGAGTGTTCTTCATCTTCTTCCAGTGCTGATGGTGAACTGTTACTTTGGAGTTCGTTGGATCTTCCTCCCATCTGCTTTGTTAACTAA 1158 0.4491 MARKRKAVELEEEGSMKWEEIAEVVAGSRRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSYSSSTPALPSKITNLLLQRLKARNNSCSAPLSSSSDFSSSGSLLVSHQQKQQGEVYNEEGYADFSVDQFTDFLNDPSEDYSLTSNDFSINGAQVDCFTSSFESCLTEKDECKGRETDLENNIAQTEEESEEVIHLGVQDFEFLDIAPSCYYYSAFEITEEMEEPVVEPAGYGDEPSMLRAAMKRMKYERKFSASLYAFNGIHECLKLKLGSGNFKGRGISDHLTNLQMACSHKEKIEENKEEKEHMGAMDMKAEENSETSVKEECSSSSSSADGELLLWSSLDLPPICFVN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2451 385 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Bisa07g2451 385 MobiDBLite consensus disorder prediction 329 355 - -
Bisa07g2451 385 Coils Coil 202 222 - -
Bisa07g2451 385 CDD AP2 33 90 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 FunFam ethylene-responsive transcription factor RAP2-11 33 92 - -
Bisa07g2451 385 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 288 - -
Bisa07g2451 385 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 MobiDBLite consensus disorder prediction 329 367 - -
Bisa07g2451 385 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Bisa07g2451 385 SUPERFAMILY DNA-binding domain 34 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2451 Bisa-ChrBisa07 54978783 54979940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2451 28 110 AP2-EREBP Transcription Factor Family AT5G19790 69.880 1.97e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g2451 AP2 1.5e-14 CL0081