Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2450 ATGGGTTGCATTAACTCCAAGAGGTTGGTCGCCGGAGATTCACCCTTGCACTCCGCCTCGAGCACCGGTCATGGGTCTGGGATTGTGAACCCTCCGTCCAGGAACCACTCGAGGACTTTGGTTTCTGAGAACAAAGGGGATGGAAAATCGGAGGATCGTAGTCGTGATGGGAAGAAGTCCAAGAAGGATGGCCCCAGAGGAAGCGGTAATTTCAGTTTCAAGATGAGCTTTTCACATAGATTCGTGGAAGCGGAGCAGAATGCGGCTGGATGGCCCCCTTGGCTCACCGCTAATGCAGGCGAAGCTATTCATGGATGGGTGCCCCTCAGAGCAGATTCTTATGTGAAACTAGACAAGATTGGACAAGGTACATACAGCAGTGTGTTCCGAGCACGTGAAGTTGAAACAGGGAAGATGTTTGCCCTGAAGAAGGTGCGATTTGACAATTTTCAACCTGAGAGCGTTAGGTTCATGTCAAGAGAAATATCAATTCTTCGCAGGCTCGACCATCCAAACATCATGAAATTGGAGGGTTTAATTACTTCCCGACTATCAACTAGCATATACCTTGTATTTGAATATATGGAGCATGATCTTGCAGGACTAGTTTCTTCTCCTGTCATCAAGTTCAGTGAAGCACAGGTTAAATGTTACATGCGGCAGCTATTGAGTGGAATTGAGCATTGTCACGTACGTGGTATTATGCATCGAGACATTAAAGTATCCAATATTTTAGTAAATAATGACGGTATTCTCAAGATAGGAGATTTTGGATTAGCAAATACAATTAGCACGAGTAACAGGCATCCATTAACCAGTCGTGTAGTGACTCTATGGTACCGTCCTCCCGAACTCTTGATGGGAGCCACCAACTACGGGGTATCAGTGGACCTGTGGAGTGTGGGTTGTGTATTTGCGGAGCTTTTTATGGGGAAGCCTGTCCTTAAGGGGAGAACTGAGGTCGAACAATTGCACAAAATTTTTAAGCTTTGTGGTTCACCGCCAGATGAGTTCTGGAGAAACTCCAAGCTTCCTCATGCAACAACGTTTAAACCACAGACTAATTATGAAAGCTCTTTTCGGGAGAGGTGTCAAGCTATTCCAGAAACTGCTGTAAAACTAATGGAGACTCTACTATCCATTGACGCCCACAAGCGTGGGACTGCCTCTTCTGCCCTTATGTCTGAGTATTTCAGCACCATGCCGTATGCTTGTGATCCGTCAAGCCTGCCAAAATATCCACCCAACAAAGAAATGGACGCTAAAAACCGGGATAATCTACGCAGGAAAGAGAATGGAGGTAACGTGCAAGAAGCTGCAACATCAAGAAAGCAAAGATGGGAAAAGCAGAACAATCCTCAAAAAGTTCTTAGAGATGATGTCAAAGCAAATATTACCAAGAGAAAAGGAGGAGCTATGCACAAGGAGCTGTCAAAACCTTCAATGGATGTAACATCAGAGACTTCCTGGAACATGAATGTGCCTCATAGCCATACTATATTATCCGGACAAGCACCGACTTCAGGATCTAGTGGTTTTGCATGGGCAAAGAGGAGAAATCCAGAGGTTTCATCCACATTATCGGATGGCTCCAGAAGTAAAATTAGTGCACTGGATCCAACCTTTGCAAAAGGCACTTATGATTTAACCAGACATGTGATCGATGCCTCTGAAAGAATATACAAGGACAAGACAGGCCATGAGGTTCAGCATGGTGATTCAGCTGATACACAATCATATCTATCAATGGATTTTGATCGCACAGAAGAAACAGATGCTTTAATGAATTCTCAGGGCTACAAGATTCAAGGCAATGAAAGTCTTCGCCCAGCAGCTGGCAGATCAAGGTTCGGAAGAGGAAACGCGCCGTTTTTGTTTTTGTCTACCCATCTTGGCTCAGCAGCACCCATGCAAATTGCAAAAGCAGCGAAGGTGGGCATAATGGATCGCAACCGCTCAGCTGCACTGGATTTGAAAATGGATGGACCAACTGGCCGTGGTGGTGCCCGTGTGGACATGTTCTTACCAAATTATAAGTGGGGAAAAACACTTGGTATTGGATCCTTTGGTAAGGTGAAAATTGCAGAGCATGTGTTGACTGGCCATAAAGTTGCCATTAAGATCCTTAACCGCCGTAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATTATACGACTATATGAAGTTATAGAAACTCCAACAGACATATATGTTGTTATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGTAGGTTGCAGGAAGATGAAGCTCGTAATTTTTTTCAACAGATCATCTCTGGCGTGGAGTACTGTCACAGGAATATGGTGGTTCATAGAGATCTGAAGCCTGAGAATCTACTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTAAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGTCCAAACTATGCTGCTCCAGAGGTTATCTCTGGAAAATTGTATGCTGGGCCTGAAGTAGATGTCTGGAGCTGTGGTGTGATTTTATATGCTCTTCTTTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCAAACCTCTTCAAGAAAATAAAGGGTGGGATATACACTCTCCCTAGTCATCTATCGCCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGGGTGACTATACCTGAGATCCGTCAACACCCGTGGTTCGAAGCCCATCTCCCACGTTATCTGGCAGTGCCGCCACCAGACACTCTGCAACAAGCCAAAAAGATTGACGAGGAAATACTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCACTTCGCAACAGGATACAAAATGAGGGTACTGTGGCATACTATTTGTTATTGGACAATCGATTTCGTGTTTCAAGTGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTTAAATCGTGTACCCAGTGACATTGCTGCTCCAGCTGTTGGGCACCGCTTTGCAGGGTACATGGATTATCAAGGAATTGGATTGAGACCACAGGTCCCTTTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGGCTGAGGTCCTTAAAGCTCTGCGAGAATTGAATGTGTATTGGAAGAAGATTGGACACTATAACATGAAATGCAGGTGGGTTGCTGGCATTGTGAGTCAGCGTGAAGGCATGGTTGACAATCACTACTTTGGAGAAGATTCCGCCATTATTGAGAATGATGCTGTTCCTGAGTCGAATGTAGTCAAGTTTGAAGTGCAGCTTTATAAAACCCGTGAAGAGAAGTATCTCCTTGATCTTCAAAGGGTCCAGGGCCCACATTTTCTCTTCTTGGATCTTTGTGCTTCTTTCCTTGCACAGCTTCATGTTCTCTAA 3504 0.4406 MGCINSKRLVAGDSPLHSASSTGHGSGIVNPPSRNHSRTLVSENKGDGKSEDRSRDGKKSKKDGPRGSGNFSFKMSFSHRFVEAEQNAAGWPPWLTANAGEAIHGWVPLRADSYVKLDKIGQGTYSSVFRAREVETGKMFALKKVRFDNFQPESVRFMSREISILRRLDHPNIMKLEGLITSRLSTSIYLVFEYMEHDLAGLVSSPVIKFSEAQVKCYMRQLLSGIEHCHVRGIMHRDIKVSNILVNNDGILKIGDFGLANTISTSNRHPLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFMGKPVLKGRTEVEQLHKIFKLCGSPPDEFWRNSKLPHATTFKPQTNYESSFRERCQAIPETAVKLMETLLSIDAHKRGTASSALMSEYFSTMPYACDPSSLPKYPPNKEMDAKNRDNLRRKENGGNVQEAATSRKQRWEKQNNPQKVLRDDVKANITKRKGGAMHKELSKPSMDVTSETSWNMNVPHSHTILSGQAPTSGSSGFAWAKRRNPEVSSTLSDGSRSKISALDPTFAKGTYDLTRHVIDASERIYKDKTGHEVQHGDSADTQSYLSMDFDRTEETDALMNSQGYKIQGNESLRPAAGRSRFGRGNAPFLFLSTHLGSAAPMQIAKAAKVGIMDRNRSAALDLKMDGPTGRGGARVDMFLPNYKWGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFEAHLPRYLAVPPPDTLQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDTGLNRVPSDIAAPAVGHRFAGYMDYQGIGLRPQVPFERKWALGLQSRAHPREIMAEVLKALRELNVYWKKIGHYNMKCRWVAGIVSQREGMVDNHYFGEDSAIIENDAVPESNVVKFEVQLYKTREEKYLLDLQRVQGPHFLFLDLCASFLAQLHVL 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2450 1167 Gene3D Transferase(Phosphotransferase) domain 1 669 1006 - -
Bisa07g2450 1167 CDD STKc_AMPK_alpha 675 930 - -
Bisa07g2450 1167 MobiDBLite consensus disorder prediction 417 432 - -
Bisa07g2450 1167 FunFam Non-specific serine/threonine protein kinase 1053 1165 - -
Bisa07g2450 1167 MobiDBLite consensus disorder prediction 1 71 - -
Bisa07g2450 1167 SMART uba_6 953 990 IPR015940 -
Bisa07g2450 1167 MobiDBLite consensus disorder prediction 15 39 - -
Bisa07g2450 1167 Gene3D Phosphorylase Kinase; domain 1 101 196 - -
Bisa07g2450 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Bisa07g2450 1167 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 SMART serkin_6 678 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Bisa07g2450 1167 SUPERFAMILY KA1-like 987 1166 IPR028375 -
Bisa07g2450 1167 MobiDBLite consensus disorder prediction 40 65 - -
Bisa07g2450 1167 FunFam probable serine/threonine-protein kinase At1g54610 197 438 - -
Bisa07g2450 1167 Gene3D Kinase associated domain 1, KA1 1053 1165 - -
Bisa07g2450 1167 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 951 991 IPR015940 -
Bisa07g2450 1167 FunFam Non-specific serine/threonine protein kinase 669 1008 - -
Bisa07g2450 1167 CDD STKc_CDK9_like 114 398 - -
Bisa07g2450 1167 CDD AMPKA_C 1047 1164 - -
Bisa07g2450 1167 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Bisa07g2450 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Bisa07g2450 1167 Pfam UBA/TS-N domain 952 988 IPR015940 -
Bisa07g2450 1167 Pfam Kinase associated domain 1 1124 1164 IPR001772 -
Bisa07g2450 1167 CDD UBA_SnRK1_plant 952 992 - -
Bisa07g2450 1167 ProSiteProfiles Protein kinase domain profile. 678 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 Gene3D Transferase(Phosphotransferase) domain 1 197 438 - -
Bisa07g2450 1167 SUPERFAMILY Protein kinase-like (PK-like) 107 405 IPR011009 -
Bisa07g2450 1167 SUPERFAMILY UBA-like 941 989 IPR009060 GO:0005515
Bisa07g2450 1167 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 1118 1166 IPR001772 -
Bisa07g2450 1167 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 646 934 - -
Bisa07g2450 1167 MobiDBLite consensus disorder prediction 408 453 - -
Bisa07g2450 1167 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Bisa07g2450 1167 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 SUPERFAMILY Protein kinase-like (PK-like) 675 946 IPR011009 -
Bisa07g2450 1167 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 Pfam Protein kinase domain 679 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2450 1167 FunFam Non-specific serine/threonine protein kinase 667 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2450 Bisa-ChrBisa07 54962274 54977605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2450 682 920 Core Cell Cycle Gene Families AT5G10270 28.819 1.10e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Bisa07g2450 Pkinase 1.7e-68 CL0016