Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2449 ATGTCTGAAAAATCGGAATCACAAAGTTGTCCATCAATGTCCACCCACCCATTCCCAGACATTCTCAACTTATATGAACATGATAGCACTGCGTTTCCCATATATGAGTTTCGAACATCAAATCTCCTTTTCCGTTATGCAACTTGCTCCATGCTAAAAAGGACGTTTCTGGTGCGTGGACTTTCTTCCGCTGAGTTTGAAGATAGCACGAAACCATCAATTGCATTTGCGCGATTCACGAAGAAAGCAGGACAAGGGAGCACTTTCAGTTACCAAATAGAGAAGGCAAAGAGCGTTTGTCATCCACCAATGGCGACGAAGAACGGCGAATCCGCGACGGCGCCGCCACCGCGTCCCACGATAACTCTACCACCACGGCCTTCTATGGAGGCCTTCTTCTCCGGTGGTTTCGGGGCAAGCCCTGGCCCCATGACCCTCGTCTCCAGCTTCTTCTCCGACAATTACCCTGACTCCGACTGTCGGTCGTTCTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGATCGCCCTCGGTGCCCGGCCTAGCTTCCTTCCGGACAATTCGACGAACAATACATCCAAAGAAGCAGGTGCTGAGGATGGAGCGCAGAAGAATTTGGGGTTCAAGCAGAGTAAACCAATGAATTTGGTGATTGCTCGTTCACCATTATTTACCGTTCCACCTGGGTTAAGCCCTTCTGGGTTGCTTAACTCACCGAGCTTCTTTCCGCCGCAGAGCCCCTTTGGGATGTCCCACCAGCAGGCCTTAGCACAGGTTACAGCTCAAGCTGTCTTAGCACAATCTCATATGCACTTGCAAGCTGATTATCAACAAATTTCAGTTACAGCTCCTGACGAATCTGTGCAGCAGCCATCCTTTGTTCCGAGCGAAACTTCGGAGCAGAAAGTTGCGCCATCTGCATCAGATCCTAGAAGTGCCCAAATCGAGACATCAGATAATTCTCATGTTGATAAGAAATATCAAACGCCTTCCTTGGCTGTTGATAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGGCAAAAGCAGGTTAAGGGGAGCGAGTATCCGCGGAGCTACTACAAATGTACACATCTGAATTGCCCAGTAAAAAAAAAGGTTGAGCGTGCCCCAGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAAGTGCCTCAGCCAAACAAGCGTACTAAAGATAATAGTGATTTAAATGGGAATACAAACATTCAAGTCAATTCTGACTCAACTACACAAGGATGGGTTGGAAATTTAAACAAGTCTGGTGAAATCGTGCCTGATCATTCAGTGCCTGAGAGTGATCAGACATCCAATCAATGTGCTCACAGGCAACTACCTGGATCAAGTGAGAGTGAGGAAGTGGGTAATGCAGATATTAGGGATGACGAGGGAGATGTTGGTGAGCCAAACGCTAAGAGAAGGAACACTGACCTTGGAGCTTCTGAAGTACCTACATCTCACAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAGGTGGTCAAGGGAAATCCTCATCCCAGGAGTTATTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGAGCTTCAACAGACCCCAAAGCTGTTATCACTACGTACGAGGGAAAACATAACCACGATGTACCTGCTGCTAGAAACAGCAGCCACAACATAGCTAATAGCTCTTCAGTTCCATTACAACCACATAAAGTGGTGCCTGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAAATAATGACCAAAGACCGGTTGCTTTGCGCTTAAAAGAAGAGCAAATCATAGTATAG 1899 0.4676 MSEKSESQSCPSMSTHPFPDILNLYEHDSTAFPIYEFRTSNLLFRYATCSMLKRTFLVRGLSSAEFEDSTKPSIAFARFTKKAGQGSTFSYQIEKAKSVCHPPMATKNGESATAPPPRPTITLPPRPSMEAFFSGGFGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPIALGARPSFLPDNSTNNTSKEAGAEDGAQKNLGFKQSKPMNLVIARSPLFTVPPGLSPSGLLNSPSFFPPQSPFGMSHQQALAQVTAQAVLAQSHMHLQADYQQISVTAPDESVQQPSFVPSETSEQKVAPSASDPRSAQIETSDNSHVDKKYQTPSLAVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEVPQPNKRTKDNSDLNGNTNIQVNSDSTTQGWVGNLNKSGEIVPDHSVPESDQTSNQCAHRQLPGSSESEEVGNADIRDDEGDVGEPNAKRRNTDLGASEVPTSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNIANSSSVPLQPHKVVPEKHPLLKDMDFGNNDQRPVALRLKEEQIIV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2449 632 Gene3D WRKY domain 323 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 Gene3D WRKY domain 503 579 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 MobiDBLite consensus disorder prediction 283 317 - -
Bisa07g2449 632 SUPERFAMILY WRKY DNA-binding domain 336 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 MobiDBLite consensus disorder prediction 182 206 - -
Bisa07g2449 632 ProSiteProfiles WRKY domain profile. 333 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 SMART WRKY_cls 518 577 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 SMART WRKY_cls 338 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 MobiDBLite consensus disorder prediction 183 198 - -
Bisa07g2449 632 SUPERFAMILY WRKY DNA-binding domain 510 578 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 MobiDBLite consensus disorder prediction 283 343 - -
Bisa07g2449 632 MobiDBLite consensus disorder prediction 389 499 - -
Bisa07g2449 632 FunFam WRKY transcription factor 319 398 - -
Bisa07g2449 632 MobiDBLite consensus disorder prediction 442 463 - -
Bisa07g2449 632 FunFam WRKY transcription factor 33 505 571 - -
Bisa07g2449 632 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 237 596 IPR044810 GO:0003700
Bisa07g2449 632 MobiDBLite consensus disorder prediction 403 430 - -
Bisa07g2449 632 ProSiteProfiles WRKY domain profile. 513 578 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 Pfam WRKY DNA -binding domain 519 575 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g2449 632 Pfam WRKY DNA -binding domain 339 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2449 Bisa-ChrBisa07 54923765 54930443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2449 118 630 WRKY Transcription Factor Family AT2G03340 53.184 3.27e-152 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa07g2449 WRKY 1.3e-25 CL0274