Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2447 ATGAGCAACAACGCCACCGGTGGTTCCTCTGGATTCCTGGGATCCAACAACATAAGTGGATTCGGGTATGGCATAGGAATCTCCAGTGGGATTCTTCTACTCATCACAACCATCACTCTCACTTCCTATTTCTGCACCAGAGTAGGGTCGTCACCAGCCACCTCTCCCTCTGCCTCTTCTGTTCGCAGAAACGCACCCACTTTCCTGGAACCGCAGCACTCGGTGGTCGATGTGGGACTCGATGAAGCCACCATTCTGAGTTACCCCAGGCTGCTGTATTCAGAGGCAAAGAAGAAAACTTCAGATTCCATAGCCACATGCTGCTCTATATGCCTGGGAGATTATAAGGGTAGGGATATGGTTAGGGCGCTTCCCGATTGTGGGCATATGTTCCACCCAAAGTGCATTGACCCATGGCTGAGGCTGCATCCCACGTGTCCTCTCTGCAGAACATCTCCTATCCCGACACCACTCTCAACGCCTCTCGCCGAGGTGGTTCCTTTGGCCGCCATGCGAGTGTCCTAG 525 0.5314 MSNNATGGSSGFLGSNNISGFGYGIGISSGILLLITTITLTSYFCTRVGSSPATSPSASSVRRNAPTFLEPQHSVVDVGLDEATILSYPRLLYSEAKKKTSDSIATCCSICLGDYKGRDMVRALPDCGHMFHPKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLAAMRVS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2447 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 154 IPR013083 -
Bisa07g2447 174 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 164 IPR045899 -
Bisa07g2447 174 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Bisa07g2447 174 SMART ring_2 108 149 IPR001841 -
Bisa07g2447 174 CDD RING-H2_EL5-like 107 150 - -
Bisa07g2447 174 SUPERFAMILY RING/U-box 107 155 - -
Bisa07g2447 174 Pfam Ring finger domain 108 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2447 Bisa-ChrBisa07 54878611 54879135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2447 10 170 C3H Transcription Factor Family AT2G35910 61.350 1.35e-55 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2177 03 31367025 31367537 Bisa07g2447 07 54878611 54879135 CCT