Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2446 ATGGCCATGCAAAGTGTTTATTTCAAAGAACATGAAGGAATTGTCCACAACTCCGTTGGGCAATTGTCCTCTGTAACTTCACCCCCCTGGTCGAGTGCCTCCCGATCTCAAGCAAAACCTTTTTCTTTGGAGTTTCCAAACTATGTTGACCAACTTGCTGTCACAAAGCAACCTGGAAGAGCAGCTCAACATGTGTTGGATAAAGGACACATAACTCAGTTCACTATCTTTCCAGATGATTGCGAAATGTCAGATGATGCACAAAAGCATCAGATGGCCATATCTCTTCAATCATCGCTTCCTGAACCTCGTGGTCACTTTGAGCTAAAATTTAGTCAGCCTATGATTTGTTCAAGATATCCTTATATGGATCAGTTTTATGGGCTCATCTCAGCTTATGGACCTCAAGTTTCGGGCCGTATAATGCTGCCACTTAACTTGGCATCAGATGATGGACCAATTTACGTAAATGCTAAGCAATACCATGGAATCATCAGACGTCGGCAGTCCCGTGCGAAAGCTGTACTACAGAATAAAATTACTAAACGTAGCAAGCCCTATATGCACGAATCACGCCACCTCCATGCAATGAGGCGACCAAGAGGATGCGGGGGTCGCTTCTTGAACACAAGAAATTCCAGTGGCTCTCAGAGTTCTGAAGTTCTGCAATCAAAGGAAACCAATGGAAGCAGTCCAAATGCTTCAGGATCAGAGGTGACTAGCATGTATTCGCGGGGAACTCTCGATTACTTCCCTCTCAATCGTCATGGATCTCTGGCAGACTTGATAGATACTGGGCGTGGCATGGTCATGCCCACAAAATGGGTTGCGGCAGCAGGTGACTGCTCCAAATTTTAA 858 0.4522 MAMQSVYFKEHEGIVHNSVGQLSSVTSPPWSSASRSQAKPFSLEFPNYVDQLAVTKQPGRAAQHVLDKGHITQFTIFPDDCEMSDDAQKHQMAISLQSSLPEPRGHFELKFSQPMICSRYPYMDQFYGLISAYGPQVSGRIMLPLNLASDDGPIYVNAKQYHGIIRRRQSRAKAVLQNKITKRSKPYMHESRHLHAMRRPRGCGGRFLNTRNSSGSQSSEVLQSKETNGSSPNASGSEVTSMYSRGTLDYFPLNRHGSLADLIDTGRGMVMPTKWVAAAGDCSKF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2446 285 Gene3D - 150 212 - -
Bisa07g2446 285 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 31 241 IPR001289 GO:0003700|GO:0006355
Bisa07g2446 285 MobiDBLite consensus disorder prediction 207 240 - -
Bisa07g2446 285 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 153 207 IPR001289 GO:0003700|GO:0006355
Bisa07g2446 285 ProSiteProfiles NF-YA/HAP2 family profile. 150 210 IPR001289 GO:0003700|GO:0006355
Bisa07g2446 285 SMART cbf3 149 210 IPR001289 GO:0003700|GO:0006355
Bisa07g2446 285 MobiDBLite consensus disorder prediction 199 240 - -
Bisa07g2446 285 PRINTS CCAAT-binding transcription factor subunit B signature 153 175 IPR001289 GO:0003700|GO:0006355
Bisa07g2446 285 PRINTS CCAAT-binding transcription factor subunit B signature 184 207 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2446 Bisa-ChrBisa07 54851653 54856838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2446 100 285 CCAAT-HAP2 Transcription Factor Family AT3G05690 45.299 2.96e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa07g2446 CBFB_NFYA 1.6e-25 No_clan