Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2437 ATGATGACTATCTTCACCTTAGATTCTATGATTCCACAATGCTTTACTTTTTCAAAGTCTATACTCAGATTGCTCATCAAAGGGGTGTTGGCTGCATCGAATGATTTGAAAAGAGAGAGTCAAATCGAAACAAGTTCCCCTGTTTTGAACTATTCGCAGAGAGATCACATTCACATACATGTGCACACATTGAGAGACGATGATGGAGCACGTGCGTACTCTAATTTCCGTCACACCAGGACCAGGATTCTTTTGAGAAGGTACCCAGATTCTCTCGAAGTCGAAGTGAAGTCACAACTAAAGGAATTAGACTCTCACCCAAAATCGATGGCGACGTACTTTCATGGTAATTCCGAAATCCAACCACCCGATGGCCTCCAAACTCTCGTCCTCATGAACCCTGGCTACATCCACTACTCCGCCGACACCACGCCGCCGCCGCCGCCGCCTCCGCACCACCCCGGCAACCTCGTCTTCCTCAACTCCATCGCAGCTGCCGGCAACAACTCCCTCACTCCCCAAACCCTCCCCCACGCGCCGCCAGCTCACTCTCAGCAATTCGTCGGCATCCCTCTACACACCTCCGCCTCCCAAGACCCCAACCAACAACACCACTCCATGCACCCCCACCACGATGTCTCCGCCTTGCATGGATTGGTGCCCCGCATGCAGTACAATCCCTGGAACACAATCGACCCGAACGCGGCGGCGCGTGACAGCCCACGCGCCCAGCAGGGTTTGTCGCTGAGCCTCTCCTCCCAGCAAGCGGGGATGGGGTCCTTCCGGGTGGACCGTGACGTGGCATCACAGGGTCAAGCGCCTGCCATCTCTGGGGAAGACGTGCGCGTGTCAGGGGGGTCGTCGTCTTCGGCGTCTGGGGTCACCCACGCGAACGGCGTGTCGGGAATTCATAGTGTGCTTCTGAGCTCCAAGTACTTAAAGGCAGCACAGGAGCTTCTCGACGAGGCCGTCAACGTCAACAACGGCATCAAGACTGAATTGGGAAACAAAAGCAGTGGTGGCCCCGCACACTCTAAGGCCATTGGAGAGTCTTCGGGAACAGCAGCCAGCGGCGACGGTTCTGTTGGTGGGGAAACTGGCGGTAAGCGTGCCTCTGAGCTATCTGCTGCGGAGAGACAAGAAATTCAGATGAAGAAGGCTAAGTTAATCAGCATGCTTGAAGAGGTGGAGCAGAGATACAGACAATACCACCAGCAGATGCAGATAGTGATTTCGTCGTTTGAGCAAGCTGCGGGAATAGGGTCGGCGAGAACATACACAGCCCTTGCGCTGCAAACAATCTCCAAGCAGTTTCGGTGCTTGAAAGATGCTATCACAGCCCAAATTCGAGCTGCTAATAGGAGCTTGGGAGAAGAAGATTGCTATGGGGCTAAAATTGAAGGTTCGAGGCTGAAATACGTAGACCATCACCTGCGCCAACAGAGAGCTCTCCAACAGTTGGGAATGATCCAGCACAACGCTTGGAGACCCCAGAGGGGATTGCCTGAACGATCTGTATCTGTTCTTCGTGCTTGGCTCTTTGAGCACTTCCTACACCCTTATCCCAAGGATTCAGACAAACACATGCTTGCTAAACAAACAGGGCTTACCAGGAGCCAGGTTTCGAATTGGTTCATAAATGCTCGAGTTCGGCTCTGGAAACCAATGGTGGAAGAAATGTACACGGAGGAGATGAAGGAACAAGAGAAGAATAATGGGTCTGAAGACAAATCCAGCAAGAGCAGTGAAGATCCTACGGCCCCACAAAAGAACGGCCCTGCCGCGGACACTGACGCTAAAAGCTTCAATTCCAAACAGGAAGTGTCTTCAAACCAGAACACTCCAACAGTAACAGTTTCTAAATCATTAATATCATCACCGGGTGAGGGCAATGTGAGAAACCGGTTTGGATTCAGCTTCATGGGGTCGTCAGAGCTCGAAGGGATCACACAAGGGAGCCCCAAGAAACCAAGGAACCATGAAATTCTGCAGTCACCAACTTCCATAAACATGGATGTGAAGCCCAGTGATGGAAACAATGACCAGCTGTCAGAGAAATTTGGAGAGCGAAGGCAGGGGAGGGATGGCTACTCTTTCATGGGAACACAGACAAACTTCATAGGAGGTTTTGGACAATACCCAATTGGGGAAATTGGGAGGTTTGATGCAGAACAATTTACTCCAAGGTTTTCAGGTAATGGGGTTTCTCTGACTCTTGGTCTTCCTCATTGTGACACGTTATCAGGAAGCCATCAAACATTTCTGCCAAACCAGAGCATTCAACTGGGAAGAAGATTGGAGATGGGTGAAGCAAACGAGTTTGGAGGCATAAACCCTTCCGCTTCTCACTCTTCAACTGCATTTCAGAACTTGAACATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGCAAGACTTTGTCACATAA 2430 0.5091 MMTIFTLDSMIPQCFTFSKSILRLLIKGVLAASNDLKRESQIETSSPVLNYSQRDHIHIHVHTLRDDDGARAYSNFRHTRTRILLRRYPDSLEVEVKSQLKELDSHPKSMATYFHGNSEIQPPDGLQTLVLMNPGYIHYSADTTPPPPPPPHHPGNLVFLNSIAAAGNNSLTPQTLPHAPPAHSQQFVGIPLHTSASQDPNQQHHSMHPHHDVSALHGLVPRMQYNPWNTIDPNAAARDSPRAQQGLSLSLSSQQAGMGSFRVDRDVASQGQAPAISGEDVRVSGGSSSSASGVTHANGVSGIHSVLLSSKYLKAAQELLDEAVNVNNGIKTELGNKSSGGPAHSKAIGESSGTAASGDGSVGGETGGKRASELSAAERQEIQMKKAKLISMLEEVEQRYRQYHQQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITAQIRAANRSLGEEDCYGAKIEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEMKEQEKNNGSEDKSSKSSEDPTAPQKNGPAADTDAKSFNSKQEVSSNQNTPTVTVSKSLISSPGEGNVRNRFGFSFMGSSELEGITQGSPKKPRNHEILQSPTSINMDVKPSDGNNDQLSEKFGERRQGRDGYSFMGTQTNFIGGFGQYPIGEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGSHQTFLPNQSIQLGRRLEMGEANEFGGINPSASHSSTAFQNLNMQNPKRFAAQLLQDFVT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2437 809 MobiDBLite consensus disorder prediction 657 681 - -
Bisa07g2437 809 Pfam Associated with HOX 306 446 IPR006563 -
Bisa07g2437 809 Pfam Homeobox KN domain 512 551 IPR008422 GO:0003677|GO:0006355
Bisa07g2437 809 CDD homeodomain 495 556 IPR001356 GO:0003677
Bisa07g2437 809 MobiDBLite consensus disorder prediction 564 583 - -
Bisa07g2437 809 Gene3D - 498 577 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 282 296 - -
Bisa07g2437 809 SMART prehox3 301 447 IPR006563 -
Bisa07g2437 809 ProSiteProfiles 'Homeobox' domain profile. 492 555 IPR001356 GO:0003677
Bisa07g2437 809 SMART HOX_1 495 559 IPR001356 GO:0003677
Bisa07g2437 809 MobiDBLite consensus disorder prediction 332 375 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 596 628 - -
Bisa07g2437 809 FunFam BEL1-like homeodomain protein 9 498 560 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 564 628 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 266 296 - -
Bisa07g2437 809 Coils Coil 379 406 - -
Bisa07g2437 809 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 204 581 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 230 253 - -
Bisa07g2437 809 Coils Coil 313 333 - -
Bisa07g2437 809 MobiDBLite consensus disorder prediction 645 681 - -
Bisa07g2437 809 SUPERFAMILY Homeodomain-like 496 562 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2437 Bisa-ChrBisa07 54679260 54685580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2437 110 808 Homeobox Transcription Factor Family AT2G35940 49.608 1.48e-180 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa07g2437 POX 3.3e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2161 03 31000692 31003040 Bisa07g2437 07 54679260 54685580 CCT
Bisa07g2437 07 54679260 54685580 Bisa07g2437 07 54679260 54685580 ECH