Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2417 ATGTCTGGTGGCGTTGGAGCTTCGAACCGCCAGGCATCGCCACCACCGGAGGCTTCCTCCGTTCAGAATCGACCGCCACTAAAGCGTCACTTGGCGTTCGCATCGACCAAGCCGCCATTTGTTCCCCCGGATGATTATCATAGCTTCTCCGCTTCCGACTCGAGGAGAGCTGCCGATCAGGAGGCTGAAGCTATTGTTGTTAGATCTCCATACATGAAGCGGAAAAATATAGTGATTGACAACAATGGAGAGTTACAGGAGTGGGGTAACAGCCCTGGACATACTGATGTGATGAATAGTCCCTTCAAAACTCCTGTGTCTACGAAAGGAGGAAGGACATACAATAAGTTAAAGGTTGCCAAGGAAGGCAGATCTGGTCCTCAGACTCCCATCTCAAATGCTGGTTCTCCTTCACTAACTCCTGCTGGCAGCTGTCGTTATGACAGTTCCCTGGGTTTGTTGACCAAGAAGTTCATCAATTTGCTCAAGCATGCTGAGGATGGTGATCTTGACCTAAATAAAGCGGCAGAAACATTGGAGGTGCAAAAGAGGAGGATATATGACATAACAAATGTTTTGGAAGGAATTGGTCTCATTGAGAAAAAGCTCAAAAATAGAATACATTGGAAGGGAATTGATTCTTCAACATCTGGAGAGGTGGATGGTGATGTATCTATGCTAAAGGCAGAAGTTGAGAAACTTTCTTTAGAAGAGCAAAGATTAGATGATCAAATAAGGGAAATGCAGGAAAGGCTGAGGAATTTGAGTGAAGATGAAAAAAATCAGAAGTGGCTTTTTGTAACTGAAGAAGATATTAAGGGCCTACCCAGTTTACAGAATGAAACTCTAATAGCTATTAAAGCCCCACATGGAACAACCTTGGAAGTCCCTGATCCTGAGGAAGCTGTTGACTATCCACAGAGAAGATATAGAATAATTCTTAGAAGCACAATGGGTCCCATTGATGTCTACCTTGTCAGTCAATTTGAGGAAAAGTTTGAAGAGATGAATAGCATCGAGCCCCCTGTGAGCTTCCCACTTGCTTCAAGTTCAGGGTCCAATGAACAACTAACAACAGAGATGGTTCCTGTTGAACACAATGGAAAAGAACTTGAATCTCAAACTCAACTATCTTCTCATACATGCTCTGATCTAAATGCTTCACAAGAGTTCAGTGGGGGCATTATGAAAATTGTTCCTTCTGATGTCGATAATGATGCAGATTATTGGCTTCTATCGGATGCTGACGTTAGCATTACAGACATGTGGAGAACAGATTCTAGTGTTGATTGGAATGGGGTGGACATGCTTCCTCCTGATTTTGGAATCATCTCAAGGCCGCAAACTCCATCATCTGGGTTTGCTGAAGGACCGTCCACATTAGCTAACTCTGAGCGAGGGAATGGAGACAAATACATTACCAGTTCGAAAACGTTAAGATCCGGGAGCTGCACTCTGGTTCTAGTGTATGGAGTGTGGCTCAGAAGGTTCAATATCAGTCACGACACAAGCTGCTCTAAGCCCATGGACGACTCCTCCGCCTTACCGCCGCCTTCACCGATGACGCCGTCAACCCTCCGCCGCTGGCAATCCATACCCACAACCGTCGTGGTGCCCACCGAGCTTTCCCTCCCACCCCACCGAGCTCCCTCACACGGCACCACCACAGCCACCGCCAGCTCTAACACGCACGCGCTCCTCGACTTGGAGCTTGACTCGATCAAATCGCCCTTCCTCTCCTACACTTCCCTCAAAGACGTGCTTCCTTCCCCCACGGCCGCCGTGAATTCCCCCACCGCCTCCTCCAGCTCTGCCTACCATATCTCCATTCGCAACCGCCTCGTCAAGCAGGCCGCTTGGGCCTACCTCCAGCCCATGTCCGCTTCCCCTTCCAGCCCATCCGCCCCAAACTTCCTCCGCCGCCTCTGCCACAGATTCTCCTCCTTCCTCCGTTTCATCTTTCACCACCTACTTCCCCGTATCACCCGGAGTTTATATCGGATGCTCCAGGCAATCGCCCGCCATGTAAGCATAAATTAA 2040 0.4838 MSGGVGASNRQASPPPEASSVQNRPPLKRHLAFASTKPPFVPPDDYHSFSASDSRRAADQEAEAIVVRSPYMKRKNIVIDNNGELQEWGNSPGHTDVMNSPFKTPVSTKGGRTYNKLKVAKEGRSGPQTPISNAGSPSLTPAGSCRYDSSLGLLTKKFINLLKHAEDGDLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIDSSTSGEVDGDVSMLKAEVEKLSLEEQRLDDQIREMQERLRNLSEDEKNQKWLFVTEEDIKGLPSLQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNSIEPPVSFPLASSSGSNEQLTTEMVPVEHNGKELESQTQLSSHTCSDLNASQEFSGGIMKIVPSDVDNDADYWLLSDADVSITDMWRTDSSVDWNGVDMLPPDFGIISRPQTPSSGFAEGPSTLANSERGNGDKYITSSKTLRSGSCTLVLVYGVWLRRFNISHDTSCSKPMDDSSALPPPSPMTPSTLRRWQSIPTTVVVPTELSLPPHRAPSHGTTTATASSNTHALLDLELDSIKSPFLSYTSLKDVLPSPTAAVNSPTASSSSAYHISIRNRLVKQAAWAYLQPMSASPSSPSAPNFLRRLCHRFSSFLRFIFHHLLPRITRSLYRMLQAIARHVSIN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2417 679 Coils Coil 224 265 - -
Bisa07g2417 679 Gene3D - 218 328 - -
Bisa07g2417 679 Gene3D - 140 213 IPR036388 -
Bisa07g2417 679 MobiDBLite consensus disorder prediction 449 469 - -
Bisa07g2417 679 MobiDBLite consensus disorder prediction 126 142 - -
Bisa07g2417 679 MobiDBLite consensus disorder prediction 504 526 - -
Bisa07g2417 679 SUPERFAMILY E2F-DP heterodimerization region 224 328 IPR037241 -
Bisa07g2417 679 MobiDBLite consensus disorder prediction 90 111 - -
Bisa07g2417 679 CDD E2F_DD 227 328 IPR032198 GO:0046983
Bisa07g2417 679 FunFam E2F transcription factor 1 140 213 - -
Bisa07g2417 679 Pfam E2F transcription factor CC-MB domain 227 327 IPR032198 GO:0046983
Bisa07g2417 679 SUPERFAMILY "Winged helix" DNA-binding domain 146 209 IPR036390 -
Bisa07g2417 679 PANTHER TRANSCRIPTION FACTOR E2F 84 429 IPR015633 GO:0000978|GO:0006357
Bisa07g2417 679 SMART E2F_TDP_2 146 211 IPR003316 GO:0005667|GO:0006355
Bisa07g2417 679 MobiDBLite consensus disorder prediction 1 18 - -
Bisa07g2417 679 MobiDBLite consensus disorder prediction 1 55 - -
Bisa07g2417 679 Pfam E2F/DP family winged-helix DNA-binding domain 148 211 IPR003316 GO:0005667|GO:0006355
Bisa07g2417 679 MobiDBLite consensus disorder prediction 90 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2417 Bisa-ChrBisa07 54390343 54398147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2417 25 464 E2F-DP Transcription Factor Family AT2G36010 58.599 1.06e-165 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bisa07g2417 E2F_CC-MB 8.1e-35 No_clan