Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2365 ATGAGTAAGCTACAAAGCGATGCACTGAGAGAGGCCATATCCCAGATTGTTACTAATTCAAAGGAGAAAAAACGTAATTTCACTGAGACTATTGAGCTGCAAATTGGATTGAAGAACTATGACCCTCAAAAAGACAAGCGTTTCAGTGGCTCTGTTAAGCTTCCTCATATTCCTCGCCCTAAGATGAAGATTTGCATGCTTGGTGATGCTCAGCATGTGGAAGAGGCGGAAAAAATAGGACTGGATTACATGGATGTGGAAGGGCTGAAAAAGCTCAATAAAAACAAGAAACTCGTCAAGAAGCTTGCCAAGAAGTATCATGCATTTCTGGCATCTGAAGCTGTCATCAAGCAAATTCCTCGTCTTTTGGGCCCCGGCTTAAATAAGGCTGGTAAGTTTCCAACACTGGTGACTCATCAAGAATCCTTGGAATCGAAAGTTAATGAAACAAAAGCAATGGTGAAGTTTCAACTTAAGAAGGTTCTTTGTATGGGTGTTGCTGTTGGAAACTGCACAATGGAGGAGAAGCAGATCTTCCAGAACGTACAACTTAGTGTCAATTTTCTTGTTTCCTTATTAAAGAAGAACTGGCAAAATGTGAGGTGCTTGTACCTTAAGAGTACAATGAGCAGTGCAATCCGCGTATTTTAG 651 0.4101 MSKLQSDALREAISQIVTNSKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCTMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMSSAIRVF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2365 216 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 216 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Bisa07g2365 216 SUPERFAMILY Ribosomal protein L1 13 216 IPR023674 -
Bisa07g2365 216 FunFam Ribosomal protein 65 154 - -
Bisa07g2365 216 Pfam Ribosomal protein L1p/L10e family 21 210 IPR028364 -
Bisa07g2365 216 CDD Ribosomal_L1 9 215 IPR028364 -
Bisa07g2365 216 Gene3D - 19 208 - -
Bisa07g2365 216 ProSitePatterns Ribosomal protein L1 signature. 116 135 IPR023673 -
Bisa07g2365 216 Gene3D - 65 154 IPR016095 -
Bisa07g2365 216 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 11 210 - -
Bisa07g2365 216 FunFam Ribosomal protein 137 214 - -
Bisa07g2365 216 FunFam Ribosomal protein L10a 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2365 Bisa-ChrBisa07 53541053 53543623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2365 1 216 Cytoplasmic Ribosomal Protein Gene Family AT5G22440 89.401 1.36e-128 359