Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2346 ATGGCGGAAGAGCACCGATGCCAAGCTCCCGAAGGCCACCGACTCTGCGCCAACAACTGTGGCTTCTTCGGCAGCCCGGCCACCATGAATCTCTGTTCCAAATGCTACAGAGATATCCGTTTGAAGGAACAACAAGAAGCCTCCACCAAATCCACCATAGAAATCGCTCTCTCCTCCACCGCTCCTGCATCGTCGTCAACGTCTTGTCCCTCACCGGCCGGCGATTTCCTCCCTGCTCCGCTGACGTTGACATTGCCGGAGGTTGCAGTGGATGCGGCGAGCTCGGCAGCAGTATCCTCCAAGGCGGAAGCAGCGGTGGCGCAACCGAACCGATGCGCGACGTGCAGAAAACGGGTGGGCTTGACGGGGTTCAAGTGCAAATGCGGTGTCACGTTTTGCGGGGTCCACAGATACCCGGAGAAACACGGATGTGACTTTGATTTCAAGAAGGTGGGGCGAGAGGAAATCGCTCGAGCAAATCCTCTGATCAAAGCTGATAAGCTTGGAAGGATTTGA 516 0.564 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEQQEASTKSTIEIALSSTAPASSSTSCPSPAGDFLPAPLTLTLPEVAVDAASSAAVSSKAEAAVAQPNRCATCRKRVGLTGFKCKCGVTFCGVHRYPEKHGCDFDFKKVGREEIARANPLIKADKLGRI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2346 171 Gene3D - 89 167 IPR035896 -
Bisa07g2346 171 FunFam Zinc finger AN1-type containing 6 87 167 - -
Bisa07g2346 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
Bisa07g2346 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Bisa07g2346 171 Gene3D - 1 70 - -
Bisa07g2346 171 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Bisa07g2346 171 SUPERFAMILY AN1-like Zinc finger 100 166 IPR035896 -
Bisa07g2346 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Bisa07g2346 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Bisa07g2346 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Bisa07g2346 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Bisa07g2346 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2346 Bisa-ChrBisa07 53347932 53348447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2346 1 171 C2H2 Transcription Factor Family AT3G52800 58.286 5.77e-55 169