Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2330 ATGGACTTGTATCTGAAGCAATGGAGAAACCAGTCTGAGTCAGAGGCAGAGGAACAACATTCTGCAAAGATGCCAAAACTTCTGCTTGAACCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTTTGTTCGTACGTGAACCCAAAGTCGGCACCTTGTCAGCATTCTCTGATTCATTAGCTATTACCAGATTTCCCCGGATGGGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGCTGCAAGCGTTGATTTTTAGGTACATGTTAGCAGGTGCTGCTGTTCCTCCCGAGCTTCTTCACCCAATCAAGAAAAGCCTTCTCCGTGCCCCTCCCTATTTCCTCCAAAATTACCCACATTATGACCCTGCTTTAGCATTACAGTCAGGGTATTGGGGAAGAGCAGCCATGGATCCAGAGCCCGGCCGGTGCCGGAGGACCGACGGCAAAAAGTGGCGGTGCTCGAGGGAAGTGGTGGCCGGCCAGAAGTACTGCGAGCGTCACATGCATCGCGGTCGAAATCGTTCAAGAAAGCCTGTGGAACTACCCACTCCAACCGCTGCCGCTGGCAGTGCTGCAACCTCCATTTCTGCGCCGTCATTGGCAACGGTTTCAATGGATTCCCCTTTTGATCTCCTTCATCTTGATCAAAGTTTCTCTGGGACCAACAATCAAAACAAGGGCCTGTTTGATATCCAAGATGATCTGAGTGGGGATGGCAGATCTGATGGCCGTATCCTGCGGCGTTTTTTTGATGATTGGCCACGATCACTTCAAGAATCTGACAATGCTGAAAGCAATGCCAATGGTAGGTCGAACAATTCGCCGACATGTTCGTCTATTTCAAGACCTAGGAACACTTCGTCGGATGTGTCTTTGAAACTGTCCACTGACAACGGAGAAAATCAGTGTCCAAGAAATGGAAATGTGGGTAGAGAGCAGCTGCAGTTAACATGGGCCGGAGGAAGGAGTTCGGCTAACCAAGTGACTTCCATGGGAGGACCACTTGCAGAGGCTCTGAGATCATCTACTTCAGCTTAG 1047 0.4995 MDLYLKQWRNQSESEAEEQHSAKMPKLLLEPHQKPQSSASALPLFVREPKVGTLSAFSDSLAITRFPRMGSYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSLLRAPPYFLQNYPHYDPALALQSGYWGRAAMDPEPGRCRRTDGKKWRCSREVVAGQKYCERHMHRGRNRSRKPVELPTPTAAAGSAATSISAPSLATVSMDSPFDLLHLDQSFSGTNNQNKGLFDIQDDLSGDGRSDGRILRRFFDDWPRSLQESDNAESNANGRSNNSPTCSSISRPRNTSSDVSLKLSTDNGENQCPRNGNVGREQLQLTWAGGRSSANQVTSMGGPLAEALRSSTSA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2330 348 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Bisa07g2330 348 Pfam QLQ 73 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa07g2330 348 SMART QLQ_2 71 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa07g2330 348 Pfam WRC 141 183 IPR014977 -
Bisa07g2330 348 MobiDBLite consensus disorder prediction 324 348 - -
Bisa07g2330 348 MobiDBLite consensus disorder prediction 170 196 - -
Bisa07g2330 348 MobiDBLite consensus disorder prediction 262 312 - -
Bisa07g2330 348 PANTHER GROWTH-REGULATING FACTOR 5 31 290 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa07g2330 348 MobiDBLite consensus disorder prediction 225 244 - -
Bisa07g2330 348 ProSiteProfiles QLQ domain profile. 72 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa07g2330 348 MobiDBLite consensus disorder prediction 261 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2330 Bisa-ChrBisa07 52990067 52992199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2330 1 348 GRF Transcription Factor Family AT3G52910 46.719 2.27e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa07g2330 WRC 1.6e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2036 03 28916258 28918286 Bisa07g2330 07 52990067 52992199 CCT
Bisa07g2330 07 52990067 52992199 Bisa07g2330 07 52990067 52992199 ECH