Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2324 ATGTTGCACAGTGCTGTACTGTGTGTTGGTGACTATGAAGAGAAAGCTTCAGCAACAACTGGTGTGCACTTTAATCTCTCAACTCCTTCTTCTCCCCTCAGATTACCCTCTGAGCTCCCGATCCCCATAAATGGCTTCCCTCAACTGTCAACTGCCACCACCGGCACCAACGATCAGTCGATCTTGTATACAATGCGTCCCGATACTTGCAGCAGTGGGAACAAGGCCCAAACAGGGCGTCACCCTGTGTACAGGGGAGTGAGGCGTAGGAGCAGTGGCAAATGGGTGTCTGAAATTCGAGAGCCCAAGAAGCCCAACAGGATTTGGCTGGGCACCTTCACTACCCCTGAGATGGCTGCCGTCGCATACGACGTCGCAGCACTTGCTCTCAAGGGCAAGGACGCTGACCTCAACTTCCCTGACTCTGCTTCTTCCTTGCCCGTCCCTGCGTCTTCCTCTGCTTCTGACATCCAGATGGCTGCAGCCAGTGCCGCTGCGGCTGTCGGGGCAGCCAACGACGCTTTGTGCGGCTCTGCCTCTCTTCCCACTGCCCAAGCTGCCATTGATGTTCCGGGAAGCTCGCAGGAGAAGCCAGAAGAGTTTGTGGATGAGGATTTGATTTTTGATATGCCCAATGTGCTCCTCAATATGGCTGAAGGAATGATGCTCTCCCCTCCTCCTTTCGACTACTCTAATTGGGACCCTTCTTCCTCCGACTACAACATATCTCAAGATCCATATCTTTGGAACTTCACTAATAATTAA 765 0.5268 MLHSAVLCVGDYEEKASATTGVHFNLSTPSSPLRLPSELPIPINGFPQLSTATTGTNDQSILYTMRPDTCSSGNKAQTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFTTPEMAAVAYDVAALALKGKDADLNFPDSASSLPVPASSSASDIQMAAASAAAAVGAANDALCGSASLPTAQAAIDVPGSSQEKPEEFVDEDLIFDMPNVLLNMAEGMMLSPPPFDYSNWDPSSSDYNISQDPYLWNFTNN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2324 254 CDD AP2 84 142 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 59 250 IPR045277 GO:0003700
Bisa07g2324 254 SUPERFAMILY DNA-binding domain 83 142 IPR016177 GO:0003677
Bisa07g2324 254 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Bisa07g2324 254 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Bisa07g2324 254 Gene3D AP2/ERF domain 83 141 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2324 Bisa-ChrBisa07 52891532 52892552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2324 75 251 AP2-EREBP Transcription Factor Family AT2G36450 52.105 4.85e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g2324 AP2 2.7e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2032 03 28818510 28820373 Bisa07g2324 07 52891532 52892552 CCT
Bisa07g2324 07 52891532 52892552 Bisa07g2324 07 52891532 52892552 ECH