Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2323 ATGGAAATGGAGGATCACCACCACCACCACCATCATCCTCATCCTCTTCAATACACTACTATGGCGGATCTGAGGCAGCTCATGATTGCACCAAGGTCCACCCATATCCCCTCAATCCCCGCGGAATCCGTTGTGGACCTCTTCCCGGGTCACCCCAATTTGACACCCACCCATAACCATCCACACTACCACATGATGCCCTTTGGTCGTCATGAACACCAACTGGTTGAAATAATGCCACCTGCCTCTACTGCCCTCCATCACTTTCCCTCCCATTCTGGTACCCTTAATACTACCATTACTGTACCCACTTCCGCCACCGCCACTGCTTCAACTCCTCCCCTTAGTGGGACAGAGGCTGACACCGGGGGCTCTTTCCCTGTAGACACCCCCACCGCACGATGGCCTCGCCAGGAGACTCTTACTCTTCTTGAGATCAGATCTCGTCTTCACCCTAAGTTCAAGCACTCTAATCAGAAGGGCCCCCTCTGGGATGAACTCTCTAGGATCATGTCCGAAGAATATGGATATCAAAGGAGCGGGAAAAAATGCAGGGAAAAATTCGAGAACTTGTACAAATATTACAAGAAAACAAAGGAAGGTCTTCAATTTCAGACCCCTTCCCAGACAAAACAAGAGACATCCATGTTGCAGTGTTACAAGCATTGTGATAGCGTGAGCCTCACTCACACTCACTCCGCTGAGTTGGACGCATCATCATCGGATGTCAATGATGAGTCCTTGGAGAACAGCAGAAAGAGGGGAAGAAGAAACTGGAAGGGAAAGATAAAAGAATTCATAGACGAAGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCGTGGTTGGATAGAGTGACCAAGACATTGGAAGAGAAGGAGAAGGAGAGGGTGTTAAGAGAGGAAGAGTGGAGTAGACAAGAGACAGCTAGGCTAGAGAGGGAGCGCGAGTTTTGGGCCAAAGAGAGGACCTGGATTGAAGCTAGAGATGCCACTCTAATGGAGGCCTTGCAAAAATTAACTGGAAGACACATAAAGGCAGATCCACCTCCTGCTGAAAACCACATTAATGAAGATGAAAGTGAAATACTACATAACACTGACAGAGTTGGTGAGATGAGCTGGCCAGAATCTGAGGTTACTACGCTTGTACAGATTAGAGCTGAGATGGAGTCGACGATTGGGCTAAGTGATTATTCAGAAGAGGTTCTGTGGGAGGAAGTAGCTACCAAAATGGCCTGTTTTGGTTATCAAAAGAATGCTTCGATGTGCAAAGACAAGTGGGAAGATATGAGAAACTATCACAAAAAGCGCAGAGAAAATTCAAGAAGCTGCTTTTACTTGGAAGCCAATGACCAGTCGTCGTCTCTATATAACCAAGGAAGTGCCTATTGTGATGTTAACCAACAACGGCAGGATGGTTCTTCACCTTCAAATTCCAACGTTGGAAATGAGAGTTGCTTTCCCTTTTTGATGTGTGAGGGAGAAAATTTGTGGGAAAATTACAGCTTGAAGCTCAATAAAGCTAACCAAAACCCGTTGGCCATTCCTTTCCTCCCTACTTGTATGTGTAATTTTGGGATGTTTAACAACAGAGCAGATATTAGGATTAATTCTAATTCTGGCTTTGACAAACTTGCTATTGCTAGGCAATCACAATCAGGTCCTGAGGCCGTGGCAGACTGA 1683 0.4629 MEMEDHHHHHHHPHPLQYTTMADLRQLMIAPRSTHIPSIPAESVVDLFPGHPNLTPTHNHPHYHMMPFGRHEHQLVEIMPPASTALHHFPSHSGTLNTTITVPTSATATASTPPLSGTEADTGGSFPVDTPTARWPRQETLTLLEIRSRLHPKFKHSNQKGPLWDELSRIMSEEYGYQRSGKKCREKFENLYKYYKKTKEGLQFQTPSQTKQETSMLQCYKHCDSVSLTHTHSAELDASSSDVNDESLENSRKRGRRNWKGKIKEFIDEEMKKVMEKQEAWLDRVTKTLEEKEKERVLREEEWSRQETARLEREREFWAKERTWIEARDATLMEALQKLTGRHIKADPPPAENHINEDESEILHNTDRVGEMSWPESEVTTLVQIRAEMESTIGLSDYSEEVLWEEVATKMACFGYQKNASMCKDKWEDMRNYHKKRRENSRSCFYLEANDQSSSLYNQGSAYCDVNQQRQDGSSPSNSNVGNESCFPFLMCEGENLWENYSLKLNKANQNPLAIPFLPTCMCNFGMFNNRADIRINSNSGFDKLAIARQSQSGPEAVAD 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2323 560 Gene3D - 374 436 - -
Bisa07g2323 560 Gene3D - 135 197 - -
Bisa07g2323 560 Coils Coil 275 302 - -
Bisa07g2323 560 CDD GT1 134 199 - -
Bisa07g2323 560 ProSiteProfiles Myb-like domain profile. 134 192 IPR001005 -
Bisa07g2323 560 CDD GT1 374 436 - -
Bisa07g2323 560 PANTHER FI21293P1 106 479 - -
Bisa07g2323 560 MobiDBLite consensus disorder prediction 106 132 - -
Bisa07g2323 560 FunFam trihelix transcription factor PTL-like 135 197 - -
Bisa07g2323 560 ProSiteProfiles Myb-like domain profile. 366 431 IPR001005 -
Bisa07g2323 560 MobiDBLite consensus disorder prediction 106 125 - -
Bisa07g2323 560 FunFam Trihelix transcription factor GT-2 374 436 - -
Bisa07g2323 560 Pfam Myb/SANT-like DNA-binding domain 134 208 IPR044822 -
Bisa07g2323 560 Pfam Myb/SANT-like DNA-binding domain 372 441 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2323 Bisa-ChrBisa07 52876432 52881115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2323 134 507 Trihelix Transcription Factor Family AT5G03680 41.277 3.34e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa07g2323 Myb_DNA-bind_4 5.3e-13 CL0123