Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2313 ATGTCATTAGGATCTGAGGCAAAAATATCTGGGCCATGCGTGGGCCCTTCTGTCCCCAGTTCCTCCAGAGCAACCACACAAAAATGGAGTTTATGGATCATTATGAACCCAAAAGATGAAAATTATCCAAAATCTCCGGCTACTTCTGATTTGATTACTGAATCTATGGGTAAAGCTCCGGCTGATACCATGTCTTCAGCTCAGTTGGAACAGGCAACGATTGGGTTCTCTCCTACTGAGTTGGGTTTTGAAGCATTTACGCTGGGGACTCTATTCGAGGATACTTCGCCCAGTCTTGCTCCGGCGGACGTTGGCCTTTCTGGGTCTCTTCCTTCGTCTTCGTTCGAAGCATTTCCAGCAATGCATCCGATGTCTATATCTTATTCTTCCTCACCAGTCATGGCTCTCGGTGAGAAAGCTCCTGTGTTACCATCATCTACCATGGAGGGGACTGGATTAATGGGAACAAGCCGGGAGTCTGAGAGCGTTGGCGTGCCACATCCGCTTGACTGTTTACAAGGGAACCCAATTCCGCCATTTCTATCTAAAACCTTCGATCTAGTGGATGATCCTTCGCTGGATCCGATTATATCATGGGGCTCGACTGGTGCGAGTTTCGTGGTATGGGACCCCTTGGAATTCGCGAGACTCATCTTGCCACGGAATTTCAAGCATAACAATTTTTCCAGTTTTGTCCGCCAGCTTAATACTTATGTGGGTATTGCAGTAACACAGCCTATAATGGCTGCTGTGATCTGTATGTAA 765 0.4719 MSLGSEAKISGPCVGPSVPSSSRATTQKWSLWIIMNPKDENYPKSPATSDLITESMGKAPADTMSSAQLEQATIGFSPTELGFEAFTLGTLFEDTSPSLAPADVGLSGSLPSSSFEAFPAMHPMSISYSSSPVMALGEKAPVLPSSTMEGTGLMGTSRESESVGVPHPLDCLQGNPIPPFLSKTFDLVDDPSLDPIISWGSTGASFVVWDPLEFARLILPRNFKHNNFSSFVRQLNTYVGIAVTQPIMAAVICM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2313 254 SUPERFAMILY "Winged helix" DNA-binding domain 175 239 IPR036390 -
Bisa07g2313 254 PRINTS Heat shock factor (HSF) domain signature 180 203 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g2313 254 PRINTS Heat shock factor (HSF) domain signature 218 230 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g2313 254 PRINTS Heat shock factor (HSF) domain signature 231 243 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g2313 254 MobiDBLite consensus disorder prediction 1 22 - -
Bisa07g2313 254 Pfam HSF-type DNA-binding 180 238 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g2313 254 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 166 238 IPR027725 -
Bisa07g2313 254 Gene3D - 173 246 IPR036388 -
Bisa07g2313 254 FunFam Heat stress transcription factor B-4 172 246 - -
Bisa07g2313 254 SMART hsfneu3 176 250 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2313 Bisa-ChrBisa07 52768334 52769458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2313 165 238 HSF AT5G03720 90.541 1.19e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa07g2313 HSF_DNA-bind 1.5e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2313 07 52768334 52769458 Bisa07g2313 07 52768334 52769458 ECH