Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2312 ATGGAAATGCCTGGTAGAAGATCCAACTACTCACTTCTGAGCCAAGTTCCTGATGACCAGTGCGGTGGCGGAGCTGCCTTGTCCGGAACAACTGCTCCCACTTCGTTATTTGATTCTTCATCCGGGGACAGTAAGAACAATAAAGGCAAGGTTGACAGAGGGTATGATTGGGACTTAGTGGCGGATCATAGGGTCGCTCAGCAGGGAAATCGGATCGGGAATATATACTCATCGATCGGGTTGCAGAGGCAGTCTAGCGGTAGCAGTTTTGGTGAAAGCTCGCTATCGGGGGAGTATTATGCTCCAACTCTGTCGACGACAGCTGTAAATGAGATCGATGTCTTTGGGTACATGCATGATGATGGATTCAAGGTTGGTGGCGGCGCTGGTGTTGGAGGCGACTTACGGAACAAGTTGACGGAGACAACCGTAAGGACGGGAGGGTCGTCATCATGTAAAAGCTGGGCGCAGCAGACGGAGGAAAGTTATCAATTGCAGCAGGCTCTGGCACTTCGACTTTCATCTGAGGCAACATGTGCTGATGATCCCAATTTTCTGGATTCTGCACCAGATGAGTCCGCTTTAAGGTCTTCATCGTCAAGCTCGGCAGAGGCAGTGTCTCATAGATTCTGGGTAAATGGCTGCCTATCTTACATTGACAAGATTCCTGATGGCTTCTACCTAATTTATGGGATGGATCCCTATGTTTGGACTGTGTGCAATGATCTGCAAGAAAATGGCCGCATTCCATCGCTTGAATCACTAAAGTCTGTAGATTCCCGCACTGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACATACTGATCCTAGCTTGAAGGAACTGCAAAATAGAGTACATAGCATTTCTTGTAGCTGCATAACCACAACAGAGGTCGTAGACTGTCTTGCCAAGTTGGTTTGCAGCCGTATGGGGGGTTCAGCTTCTGTTGGTGAAGATGACTTTGTTTCCATCTGGATGGAGTGCAGTAATGATCTTAAAGATTGCTTGGGATCTGTTGTTGTTCCAATAGGTAGTCTATCTGTCGGCCTCTGCAGGCATCGTGCTATACTGTTCAAAGTACTAGCTGATGCCATTGATCTACCATGTCGAATTGCTAAGGGCTGTAAATATTGTTCAAGAGATGATGCTTCCTCTTGTCTTCTCCAATTTGGGCTTGACAGGGAATATCTAGTTGATTTAATTGGGAAGCCAGGTTACTTATGTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTTTCGGATTGTCTATCTCTTGAGATTGTCTTTGACAATGACTCTGCAGAACAGTTTGATGGGAAGTGCAGGGACAGAAATATTCCTAGGTCAAATTCAAATGACGGCAAGAGAACTTCTCGCCGTACTCTGCATCCGCAAATTTCTCATTTAAGGAATCAAGATCAAGGTTCTGAAACATTTAAGTCATGCAACCCTCCTCAGAACATTGTAGACTCCACAACTATGGGCAAGGGTCCACTGCATACTCCTATAACACTGTCAAATTCAAATGTGGATGCTATTGAGGGTAGGAGGTTTGCAGATGGAAGTCCACTTATTTCTAGCAAAGCCAGTAGAGAGCTTGGCCTTGATATGGAGGATTTGGACATACCTTGGAGCGATCTTGTTTTAAAAGAGAGAATAGGATCGGGTTCTTTTGGAACAGTTCATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTAATGGAACAAGATTTTCATGCTGAAAGATTCAAGGAGTTTCTGAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATCGTTTTATTTATGGGTGCAGTTACTCAGCCTCCAAATTTATCAATTGTCACAGAATATTTGTCTAGGGGTAGCTTATACAGGTTGTTGCATAAACCTGGTGCCAGAGAGATGTTAGATGAGAGACGTAGGATGAGCATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGCAATCCTCCTATTGTTCATAGAGATCTGAAGTCTCCAAATCTTCTTGTGGACAGGAAATATACAGTGAAGGTTTGTGATTTTGGTCTTTCACGCCTCAAGGCAAATACTTTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCCCCGGAAGTTCTTCGGGATGAGCCATCAAATGAGAAGTCAGATATTTACAGCTTTGGTATAATCTTGTGGGAGCTTGCAACATTGCAACAGCCATGGAGCAATTTGAATCCTGCACAGGTTGTGGCAGCCGTTGGCTTTAAAGGCAAAAGACTTGAGATTCCACGTGATTTGAATCCGCAAATAGCAGCAATAATTGAGGCTTGCTGGGCCGATGAGCCTTGGAAGCGTCCTTCTTTTTCAAGTATCATGGATTCTTTAAGATCATTGATCAAACCTCCTGCACCTCAACCTGGTCGGCCGAACATACCATTACTTACATGA 2556 0.4476 MEMPGRRSNYSLLSQVPDDQCGGGAALSGTTAPTSLFDSSSGDSKNNKGKVDRGYDWDLVADHRVAQQGNRIGNIYSSIGLQRQSSGSSFGESSLSGEYYAPTLSTTAVNEIDVFGYMHDDGFKVGGGAGVGGDLRNKLTETTVRTGGSSSCKSWAQQTEESYQLQQALALRLSSEATCADDPNFLDSAPDESALRSSSSSSAEAVSHRFWVNGCLSYIDKIPDGFYLIYGMDPYVWTVCNDLQENGRIPSLESLKSVDSRTDSSLEVVLVDRHTDPSLKELQNRVHSISCSCITTTEVVDCLAKLVCSRMGGSASVGEDDFVSIWMECSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCSRDDASSCLLQFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLEIVFDNDSAEQFDGKCRDRNIPRSNSNDGKRTSRRTLHPQISHLRNQDQGSETFKSCNPPQNIVDSTTMGKGPLHTPITLSNSNVDAIEGRRFADGSPLISSKASRELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRMSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDRKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGIILWELATLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQIAAIIEACWADEPWKRPSFSSIMDSLRSLIKPPAPQPGRPNIPLLT 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2312 851 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2312 851 CDD STKc_MAP3K-like 583 831 - -
Bisa07g2312 851 MobiDBLite consensus disorder prediction 469 490 - -
Bisa07g2312 851 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Bisa07g2312 851 FunFam Serine/threonine-protein kinase isoform 1 567 655 - -
Bisa07g2312 851 FunFam Serine/threonine-protein kinase CTR1 656 841 - -
Bisa07g2312 851 MobiDBLite consensus disorder prediction 469 496 - -
Bisa07g2312 851 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 Pfam Ethylene-responsive protein kinase Le-CTR1 203 409 - -
Bisa07g2312 851 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Bisa07g2312 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 166 834 - -
Bisa07g2312 851 MobiDBLite consensus disorder prediction 32 51 - -
Bisa07g2312 851 SUPERFAMILY Protein kinase-like (PK-like) 564 830 IPR011009 -
Bisa07g2312 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Bisa07g2312 851 Gene3D Transferase(Phosphotransferase) domain 1 656 840 - -
Bisa07g2312 851 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Bisa07g2312 851 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2312 Bisa-ChrBisa07 52742976 52761919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2312 1 847 MAP Kinase Kinase Kinase AT5G03730 67.903 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa07g2312 PK_Tyr_Ser-Thr 1.3e-70 CL0016