Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2304 ATGGAAGAAAAGGACACGTCACTTTTCGGGTCGCCCGGCAACTCCGTGTCTGGGTCGACCGCACAACCCATCGAAGCCTTCCTGCCCCAGGACACCAGCACGGCGCCAACAGTCGCTGATGCACCAGCTGCCACGGCGACAATGACGTCACCGGCGAGCACAGGAGGAGGCGAAGGAAGCTTTGACTTGTTTGGGAAAAAGAAGAGAGGGAGGCCGAGAAAATACGACTCAGATAGGAAGACGACGTCGTACCAGGGTGCACCATCCTCTCCCCAAGGCTTCTCTTTGACCCCATCTTCACCTTCCGGCTCCTCTTCCAAAAGGGGTCGAGGCAGACCTCCTGGCTCTCGCAACTTGCAGGGCCTTGCATTTTTAGGTGAGTTGTTTGCAAACACAGCTGGTGGGAATTTTACACCTCATGTCCTCACTGTTCAAACTGGAGAGGATGTTGCCGGAAAAATCTTGTCATTAGCCCAGCAAGGGCCTAGAGGAGTCTGCGTTCTTTCTGCAAATGGAGCTATATCTAATGTCACCATACGGCAGCCTGGTTCTTCTGGTGGCTTATTGACCTACGAGGGTCGATTTGAGATTTTATCTTTGTCTGGGTCATTCACAGCCTCCGACAACAGTGGCGCAAGAAGTCGAAGTGGTGGGTTGAGTGTCTCACTGGCTGGCCCTGATGGTCGTGTGATAGGAGGTGGTGTTGCTGGTTTATTGACGGCTGCTAGCCCTATCCAAATGGTGCTGGGAAGCTTCATGCCCAGTGGTTACAACAAGGCACAGAGAAGAAAGCAACATCGTGAGAACGCAGTGGCGTCTCCAGTTTCTGGTGCAGATACGGTGACGGCGGCGAGGCCTATCTCACAGGCGAATCCTGATTGTGGTGAAACCAGTTTGTCACCCATGTCCCAGCAGCAGCTTCCTGAACAAAGCCAGAGAGAATCAGACAACCTTACAGGTAGTGATAAACAGAGCTTAGATGCCACACCCAATGCTTCTGATTGGAATGGCTTTGAAGAATTGTCGGATCAGGGGCCAACCCCAGACATCAATATATCTTTGCCTGGTGAATAG 1074 0.5251 MEEKDTSLFGSPGNSVSGSTAQPIEAFLPQDTSTAPTVADAPAATATMTSPASTGGGEGSFDLFGKKKRGRPRKYDSDRKTTSYQGAPSSPQGFSLTPSSPSGSSSKRGRGRPPGSRNLQGLAFLGELFANTAGGNFTPHVLTVQTGEDVAGKILSLAQQGPRGVCVLSANGAISNVTIRQPGSSGGLLTYEGRFEILSLSGSFTASDNSGARSRSGGLSVSLAGPDGRVIGGGVAGLLTAASPIQMVLGSFMPSGYNKAQRRKQHRENAVASPVSGADTVTAARPISQANPDCGETSLSPMSQQQLPEQSQRESDNLTGSDKQSLDATPNASDWNGFEELSDQGPTPDINISLPGE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2304 357 MobiDBLite consensus disorder prediction 282 340 - -
Bisa07g2304 357 Gene3D - 139 270 - -
Bisa07g2304 357 MobiDBLite consensus disorder prediction 259 357 - -
Bisa07g2304 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Bisa07g2304 357 Pfam AT hook motif 66 77 IPR017956 GO:0003677
Bisa07g2304 357 Pfam AT hook motif 107 118 IPR017956 GO:0003677
Bisa07g2304 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 260 - -
Bisa07g2304 357 ProSiteProfiles PPC domain profile profile. 134 274 IPR005175 -
Bisa07g2304 357 CDD DUF296 138 252 IPR005175 -
Bisa07g2304 357 MobiDBLite consensus disorder prediction 62 80 - -
Bisa07g2304 357 SMART AT_hook_2 66 78 IPR017956 GO:0003677
Bisa07g2304 357 SMART AT_hook_2 107 119 IPR017956 GO:0003677
Bisa07g2304 357 MobiDBLite consensus disorder prediction 81 111 - -
Bisa07g2304 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 312 IPR039605 GO:0003680
Bisa07g2304 357 MobiDBLite consensus disorder prediction 1 119 - -
Bisa07g2304 357 MobiDBLite consensus disorder prediction 8 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2304 Bisa-ChrBisa07 52644228 52646952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2304 66 290 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.191 4.22e-70 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2304 07 52644228 52646952 Bisa07g2304 07 52644228 52646952 ECH