Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2299 ATGAACAAGCCTCGTCCCATAGACCCTGCATTGCCCTTGGCCTTGGCCTTCATTTTGGTATTACACTGTTTCACACCATCTCTGGGTCTAAACCAAAATGATACACACGCCCTCACCCAATTCCGTCTCCAAGCCGACGCCCACGGCTACCTTCACCCCAACTGGACCGGCGCCGACGCTTGTGCAGCCTTCTGGCGAGGCGTTCAGTGCTCCCCAAATGGGCGAGTCGTCGGCGTCTCGCTTCCTTCCCTTAACCTCCGAGGCCCGCTTGATTCTTTGTCCTCACTGAGCTATTTGCGCCTCCTTGACCTCCACGATAACCGCTTAAACGGCAGCATTGCCTCTCTCTCTAACTGCACCAGCCTGGAGCTACTTTATCTCTCCGGCAACGACCTCGCCGGCGAGATACCATCGGAGCTAGCCTCGCTCACGCGTCTCCTCAGGGTTGACCTCTCTGACAACAACATCCGAGGCCCGATTCCTAAGGAACTGACCAAATTGACTGAGCTTCTCACTCTTCGGCTTCAGAACAACGAACTTTCTGGGCAAATCCCTGATCTCTCTGTCTCTCTGGTCAATCTCAAGGAGCTCAATATGACCGACAACGAGTTTTCTGGAGACTTACCCGATGGAATGTTGAAGAAATTCGGTGATGTAAGCTTCTCTGGGAATAAAGGCCTTTGTGGGTCGAGTCCAATCCCACATTGTTCCAGCACAACAGAGAATCCTCCTTCTTCTTCGGCATCGGATCTGACAGTTCCTTCTAACAGTAGTCCGTCACCCGAAACAAGCGTGACGACTCCGCTGAAAAGCCAACCCCGAAAGGGGTTAACTCCCGGAGTTATAGTAGCCATTGTCGTGGCGATTTGTGTGGCACTGCTCGTCATAACCTCTTTCATGGTGGCTCACTGTTGCGCCAGAGGACGGACCTCCTCTTCCCTGGCGGGTAGCGAGATTGGGAAGAGGAAAAGTGGGAGTAGCTATGGAAGTGAGAAGAAGGTATATGCGAGTGGGGGTGCAGATAGCGATGGGACAAGTGGGACGGACCTAAGCAAGCTCGTGTTTTTCGATCGAAGGAATCAATTTGAGTTGGAGGATTTGCTGCGAGCATCGGCGGAGATGCTGGGGAAGGGAAGCTTGGGGACAGTTTACAAAGCTGTGCTTGACGATGGGTGTACCGTTGCCGTGAAGAGGCTCAAAGACACAAACCCATGCGCCAGGAAGGAGTTCGAGCAGTACATGGATGTGGTCGGAAAGCTCAAGCACCCCAACATTGTCAGACTCAGAGCCTATTACTATGCCAGAGAAGAAAAGCTTCTTGTATATGACTACCTCCCCAATGGAAGCTTGCATTATCTTCTCCATGGGAATCGTGGTCCTGGAAGAATCCCATTGGACTGGACTACAAGAATAAGCTTGGTTTTAGGAGCAGCCAGAGGACTAGCTCGGATTCACGCAGAGTACAGTGCAGCAAAAATACCTCACGGCAACGTAAAATCTTCCAATGTGGTACTAGACAAGAATGGCGTTGCTTGCATCTCTGACTTCGGCTTGTCCCTGCTGTTGAACCCTGTTCAAGCCATTGAAAGATTAGGTGGATACAGAGCACCTGAACAGGAAGAAGTAAAGAGGCTGTCTCAGCAAGCAGACGTGTACAGCTTCGGGGTCTTGCTGTTGGAAGTCATCACAGGGAAAACCCCATCAAAGGAGCCTTCACCCACTCGTGCTCGTATGGGTGAAGAGGAACAATCAGTGGATCTCCCAAAATGGGTGCGATCTGTAGTCAAGGAAGAGTGGACAGCAGAAGTGTTCGATCAAGAACTGTTGAGGTACAAGAACATAGAGGAGGAGCTGGTGTCGATGCTACATGTGGGGTTGGCTTGTGTGGTGGCCGAGCCGGAGAAGAGGCCAACAATGGCGGAAGTGGCTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTCTGGGAGAGGATTACGATGAGTCTCGCAATTCACTTTCTCCTTCCCTTCCCACCACTGAAGATGGGCTTGCTTAA 2040 0.5162 MNKPRPIDPALPLALAFILVLHCFTPSLGLNQNDTHALTQFRLQADAHGYLHPNWTGADACAAFWRGVQCSPNGRVVGVSLPSLNLRGPLDSLSSLSYLRLLDLHDNRLNGSIASLSNCTSLELLYLSGNDLAGEIPSELASLTRLLRVDLSDNNIRGPIPKELTKLTELLTLRLQNNELSGQIPDLSVSLVNLKELNMTDNEFSGDLPDGMLKKFGDVSFSGNKGLCGSSPIPHCSSTTENPPSSSASDLTVPSNSSPSPETSVTTPLKSQPRKGLTPGVIVAIVVAICVALLVITSFMVAHCCARGRTSSSLAGSEIGKRKSGSSYGSEKKVYASGGADSDGTSGTDLSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDTNPCARKEFEQYMDVVGKLKHPNIVRLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNVKSSNVVLDKNGVACISDFGLSLLLNPVQAIERLGGYRAPEQEEVKRLSQQADVYSFGVLLLEVITGKTPSKEPSPTRARMGEEEQSVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVAEPEKRPTMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2299 679 FunFam pollen receptor-like kinase 1 340 444 - -
Bisa07g2299 679 Gene3D Ribonuclease Inhibitor 27 93 IPR032675 -
Bisa07g2299 679 Gene3D Ribonuclease Inhibitor 94 243 IPR032675 -
Bisa07g2299 679 MobiDBLite consensus disorder prediction 315 345 - -
Bisa07g2299 679 Gene3D Transferase(Phosphotransferase) domain 1 445 666 - -
Bisa07g2299 679 MobiDBLite consensus disorder prediction 653 679 - -
Bisa07g2299 679 SUPERFAMILY L domain-like 33 229 - -
Bisa07g2299 679 CDD STKc_IRAK 375 649 - -
Bisa07g2299 679 ProSiteProfiles Leucine-rich repeat profile. 98 120 IPR001611 GO:0005515
Bisa07g2299 679 Gene3D Phosphorylase Kinase; domain 1 343 444 - -
Bisa07g2299 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 651 IPR046959 -
Bisa07g2299 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 658 - -
Bisa07g2299 679 Pfam Protein kinase domain 373 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g2299 679 MobiDBLite consensus disorder prediction 232 275 - -
Bisa07g2299 679 MobiDBLite consensus disorder prediction 232 273 - -
Bisa07g2299 679 SUPERFAMILY Protein kinase-like (PK-like) 373 646 IPR011009 -
Bisa07g2299 679 FunFam Nuclear pore complex protein NUP107 31 186 - -
Bisa07g2299 679 ProSiteProfiles Protein kinase domain profile. 369 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2299 Bisa-ChrBisa07 52562563 52564676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2299 27 675 Receptor kinase-like Gene Family AT2G36570 66.716 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa07g2299 Pkinase 6.6e-34 CL0016