Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2295 ATGGGTGATGTCGTAACTACTAGGCAATGGTCCCTATTCGGCGCCGTTTGCGCAGAGTCACTTATAGTTCATCTTCAGCCCCATCGCCTTCTGACACCATTTGAATTTCTCAAGGGTACTAACCTACATCTCACTGTCATGGAAGGATGGTCCATAACCGAAACAGTCTTTGTGTACTGGTCACCCACTTTAGAAGCCATACCTCTTCCCCAAGGAAGAGACAGGAAAGTGAAGGCAGATATGGATTGGAATGGAAGCATAGGACCCTTTGTTCCTCGAGCAGAGTCTTCCTTAAGTTTCCTCTACAATTATAACTGCAGCCCATATCCAGGAATGGAAGTGAAACATGCTGGAGAAGCACAAGGATTGATTCCTGAAATGGAGAAAATGAAGTACGGAAACCAGGTGGAGAAGAAGAAGAGATTAACAAGCGAGCAGCTTGACTCACTGGAGAGGAGTTTCCAGGAAGAGATAAAGCTGGACCCCGATAGAAAGATGAAGCTTTCAAGGGAGCTAGGGCTGCAGCCTCGCCAAATTGCTGTTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGGCTAAGCAACTCGAGCACTTGTATGATTCCCTCAAACAGGAATTTGATGCCATCTCTCAGGAAAAACAGAGGCTTCAGGAAGAGGTAGTGAAGTTGAAGGCGATACTGAGAGAGCAAGGTTCAAGGACACAGGTGTCTGGAGGATATACAGAACTGTCTGGTGAAGAAACAGTAGAAAGCAGGTCAGAAGCAGCACTGCGTAGCTCTAACAAGCAGCCACGGGGAATCACGAGCCATCATCAGCAGAATATGGCAGAAGCTAACAGTTCCTTCATGGTGGAGGATTATCCCACTGTTTCAGTGCCTTACTGGCCAGCTTTTGTGCCTTATTATCCCTAA 912 0.4693 MGDVVTTRQWSLFGAVCAESLIVHLQPHRLLTPFEFLKGTNLHLTVMEGWSITETVFVYWSPTLEAIPLPQGRDRKVKADMDWNGSIGPFVPRAESSLSFLYNYNCSPYPGMEVKHAGEAQGLIPEMEKMKYGNQVEKKKRLTSEQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLEHLYDSLKQEFDAISQEKQRLQEEVVKLKAILREQGSRTQVSGGYTELSGEETVESRSEAALRSSNKQPRGITSHHQQNMAEANSSFMVEDYPTVSVPYWPAFVPYYP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2295 303 Gene3D - 131 200 - -
Bisa07g2295 303 MobiDBLite consensus disorder prediction 254 273 - -
Bisa07g2295 303 SMART HOX_1 136 197 IPR001356 GO:0003677
Bisa07g2295 303 MobiDBLite consensus disorder prediction 234 273 - -
Bisa07g2295 303 ProSitePatterns 'Homeobox' domain signature. 168 191 IPR017970 GO:0000981|GO:0006355
Bisa07g2295 303 Coils Coil 185 233 - -
Bisa07g2295 303 CDD homeodomain 138 194 IPR001356 GO:0003677
Bisa07g2295 303 FunFam Putative homeobox-leucine zipper protein ATHB-51 135 198 - -
Bisa07g2295 303 Pfam Homeodomain 138 191 IPR001356 GO:0003677
Bisa07g2295 303 ProSiteProfiles 'Homeobox' domain profile. 133 193 IPR001356 GO:0003677
Bisa07g2295 303 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 128 273 IPR045224 GO:0003700
Bisa07g2295 303 Pfam Homeobox associated leucine zipper 193 227 IPR003106 GO:0006355|GO:0043565
Bisa07g2295 303 SUPERFAMILY Homeodomain-like 128 195 IPR009057 -
Bisa07g2295 303 PRINTS Lambda-repressor HTH signature 164 173 IPR000047 GO:0003677
Bisa07g2295 303 PRINTS Lambda-repressor HTH signature 173 189 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2295 Bisa-ChrBisa07 52504724 52508438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2295 96 223 Homeobox Transcription Factor Family AT5G03790 60.870 1.10e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa07g2295 Homeodomain 7.3e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2295 07 52504724 52508438 Bisa07g2295 07 52504724 52508438 ECH